Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01710 ATGATAACCAGATCGAGAAAATTGAAGCGCAAGCTCGAGCCGGAGCCACTACCACTCATCTTCACCAAGAAGCTCCGGCAGAAGCTGTCTCGCCGCCGACGGCAAAACTTCTCGCCGGTGCTTCTTGTCAGAAACTCTGGCCACAATCCTCGTTGCTCCATGGATTCCAGCTCCGGCTCCGGCTCCGGCTCCGACTTCGCTGCCGGCGAAGCTTCTTGCAATTCCAGCAGAGCTTCCATCGCCGGCAAGGGAAACACGAACTCGAGAAACGAATCATCGACCGATTCAACGAGAAATCAGAGGTTCGAGAAGCGAAACGAGATCGAAGTGGATGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGAGCGAAGCAGAAGCTCAATTCTGAGGTTCAAAAACGTAAGAGAATCTAAGAATATAACAGGAGAAGACGACGTTTCGAAAGTGTGCGTGAAACCGGATATTAATGCAACACTGAAGTTCAAAAGCGGAAGCGAGAGTAAGAATGTAAAGGAAAATGACGCTGTTTCGTTCGGGAAATCAGAGATTACTTGCGAGGAACAGTTCAATTCGAAGTCCTCCAGTGACGGAAATGGAAACATGAAAATCTATTCGGAGTCAAACGGAAACGACGTCGTGTCCTTTTGTTCCGGTGTTCGCGCGTCGTTTGAGGAGGAAAAGAATAGCAGCAAGGAGAACAGAGCGCTGGAATGTGAATACTCTGAAGGTTCTAAAAAGCTCCACGTGGAAGAGAGTTGCGTGGATTTAATAGCGCAATCGGTGACGAAGCAGGAATCGGAAAATTACGATCTCGTTGTGGACCTCACTTGCTCCGAGGATCTGCGTTTCTCGTACTGTGACGACGATGACAAATCGGAATATTGTTCCAGCCAGGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAGTGCTCGCAGCCGGAGCTATCGGATTACTCCCCGTCCCTGTACGTAGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACAACTCTAGTTTCTGCTTCTCCAGTAATGAACTCTTCTTCAAGTGACGAAGATGATGCCAATTTTGTGAGATTTGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGAATGGAATTATGGTGAAAGATATTTCTCTACCACTGAATTTGGAGAGACCGTGCTTGATCAACGTGCACAAATGGTTCACTGGATCGTTGAGCAATCATGTCGAAAACAGCTTCGGCAAGAGACGATTTTTCTCGGAGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCTGAAAGACACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGACCAGGATCGAAGAAAATCAGCAAAACAACAGAGTGGGACAAACCAGTTTCTACATAGGAAGCAATAAGTACAGTAGAGGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCTACCTACCATCTACAATTTCTTGTGGTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCATTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCTGCACTTGTAGTCCTGGCTGGTCTTGAAGTCAATCAAAGTTCATCCCTCAAAGTCATTCGGGTAACTACTATTGCGATATAG 1806 0.4729 MITRSRKLKRKLEPEPLPLIFTKKLRQKLSRRRRQNFSPVLLVRNSGHNPRCSMDSSSGSGSGSDFAAGEASCNSSRASIAGKGNTNSRNESSTDSTRNQRFEKRNEIEVDVSESSCADSNSFARERSRSSILRFKNVRESKNITGEDDVSKVCVKPDINATLKFKSGSESKNVKENDAVSFGKSEITCEEQFNSKSSSDGNGNMKIYSESNGNDVVSFCSGVRASFEEEKNSSKENRALECEYSEGSKKLHVEESCVDLIAQSVTKQESENYDLVVDLTCSEDLRFSYCDDDDKSEYCSSQGTVFSEFHSEIFGECSQPELSDYSPSLYVDSGSQFSEGSVGETPSPTYLLFLQYRKEFTTLVSASPVMNSSSSDEDDANFVRFEDSDDEDSYQMLRKRERKQGFEWNYGERYFSTTEFGETVLDQRAQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLSKGYFKAERHLQIVGIACLTLATRIEENQQNNRVGQTSFYIGSNKYSRGEVVAMEWMVQEVLKFQCFLPTIYNFLWFYLKAANADAVIEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEVNQSSSLKVIRVTTIAI* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01710 601 Gene3D - 420 522 - -
Lapu2g01710 601 MobiDBLite consensus disorder prediction 28 110 - -
Lapu2g01710 601 Pfam Cyclin, N-terminal domain 423 525 IPR006671 -
Lapu2g01710 601 SUPERFAMILY Cyclin-like 529 587 IPR036915 -
Lapu2g01710 601 MobiDBLite consensus disorder prediction 39 95 - -
Lapu2g01710 601 Pfam Cyclin, C-terminal domain 529 588 IPR004367 -
Lapu2g01710 601 SUPERFAMILY Cyclin-like 387 525 IPR036915 -
Lapu2g01710 601 ProSitePatterns Cyclins signature. 428 459 IPR006671 -
Lapu2g01710 601 Gene3D - 523 596 - -
Lapu2g01710 601 PIRSF Cyclin_A_B_D_E 346 592 IPR046965 GO:0016538|GO:0044772
Lapu2g01710 601 PIRSF Cyclin_A_B_D_E 53 284 IPR046965 GO:0016538|GO:0044772
Lapu2g01710 601 PANTHER CYCLINS 370 581 IPR039361 -
Lapu2g01710 601 SMART cyclin_7 433 520 IPR013763 -
Lapu2g01710 601 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01710 Lapu-Chr2 30855184 30859907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01710 426 588 Core Cell Cycle Gene Families AT5G11300 36.095 2.54e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01710 2 30855184 30859907 Lapu2g01710 2 30855184 30859907 ECH