Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01709 ATGGAAGCTACACAAATTGGAGAAAAGGGTGTTCTTGAGGGAAGTCAAACTATTGCTGCAGGTGGGAAAGAAAATGAAGAAGTTCTAAAGAAGATCATTGCAACTCATCCTTTGTATGAAGTTTTGATTCAATCTCACCTTAGCTGCTTGAAGGTTGGATTAAGTGAAGCTGAAGAGTTTGATGCAACAAGTGATGATGCATGGAAGAAGGTGGTGAATTCCAAGTCCAAAGCAACTCCTAGTCCAACCACTTCAGAGTTAGATCACTTCATGGAAGCTTATTGCATGGCACTGAGCAAGCTGAAAGAAGCAATAGAAGAACCAACAAAAGAAACCAATGCTTTCATCAGAGCTACGTATCTTGAACTAAAGCAACTCGATGAACAACTGAACCACTCATAA 402 0.4005 MEATQIGEKGVLEGSQTIAAGGKENEEVLKKIIATHPLYEVLIQSHLSCLKVGLSEAEEFDATSDDAWKKVVNSKSKATPSPTTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYLELKQLDEQLNHS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01709 133 SMART KNOX2_2 77 128 IPR005541 GO:0003677|GO:0005634
Lapu2g01709 133 Pfam KNOX2 domain 85 126 IPR005541 GO:0003677|GO:0005634
Lapu2g01709 133 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Lapu2g01709 133 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 129 - -
Lapu2g01709 133 SMART KNOX1_2 27 69 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01709 Lapu-Chr2 30848905 30850517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01709 27 126 Homeobox Transcription Factor Family AT4G08150 34.314 4.58e-12 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01709 2 30848905 30850517 Lapu2g01709 2 30848905 30850517 ECH