Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01694 ATGTCATCTCAAACTGCCTCAGAGGAGGCGCCGCTGCTCCGCACCCGCCACGACGCCGCCCGAGCGCCTGCGCTGGCGCTCCTCCTTGGCCGCGCCGGCCGCCGAGGCCCCTCCATGCTGGTGCGGGAGACGGCGGCGCGCGAGCTCGAGGAGCGCCGCGCGGACTGGGGCTATTCCAAGCCGGTGGTTGCGCTCGACATGTCGTGGAACATGGCCTTCGTTGTGGTATCGGCGGCGATGCTCGCATGCACCACCGGCGAGCGGCCGAACACGCCGATCCGCGTGTGGATCGCCGGGTACGCGCTGCAGTGCCTTGTGCACGTGGTGCTCGTGTGGCTCGAGTACCGGCGCCGTGGCAGGAGGGAATCGCGCCGGGGCCAGGAGGCGCGGGACGTGGAGAGCAATGCCGGCAGCAACAACGATGATGGCGGCAACGACAGCGACAGCGATGACATAGATGGAAGCTCTGGCAATTCGTCTCGCTACCGGTTCACAAAACGATGTGAATCATTAAATACTGGGGTTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATACTTGTGCAAGCTGCCCCACGATTGTACTGGTTGTCTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTCTTGGCGTGCTTGATTGGTATTGCTCTTTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCGTCAGAAGCAGATCTTAGCATGCTTCCAAAATACAGATTTAGAATATTAAGCAATGAGGATAAGCCCAGTGGTGGAGCTGGATCAATGGTTCCCTTAGAAACCAGCAGTGCTTACTTGGCAAATGAACGAATACTTTTACCAGAGGATGCGGAATGCTGTATATGCCTCTGTTCATATGAGGATGGAGCAGAGCTCCATGCTCTTCCTTGCAACCATCATTTTCATTCTTCATGCATAGCGAAATGGCTGAAGATGAATGCCACTTGTCCTCTCTGCAAGTACAATATTCTCAAGGGAAACGATCAAGTGTGA 1062 0.5499 MSSQTASEEAPLLRTRHDAARAPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTGERPNTPIRVWIAGYALQCLVHVVLVWLEYRRRGRRESRRGQEARDVESNAGSNNDDGGNDSDSDDIDGSSGNSSRYRFTKRCESLNTGVSFLWWIVGFYWVVSGGDILVQAAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSNEDKPSGGAGSMVPLETSSAYLANERILLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIAKWLKMNATCPLCKYNILKGNDQV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01694 353 ProSiteProfiles Zinc finger RING-type profile. 302 343 IPR001841 -
Lapu2g01694 353 MobiDBLite consensus disorder prediction 124 160 - -
Lapu2g01694 353 Pfam Ring finger domain 301 343 IPR001841 -
Lapu2g01694 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 348 IPR013083 -
Lapu2g01694 353 CDD RING-H2_PA-TM-RING 301 343 - -
Lapu2g01694 353 FunFam E3 ubiquitin protein ligase RIE1 282 350 - -
Lapu2g01694 353 PANTHER TARGET OF ERK KINASE MPK-1 32 349 - -
Lapu2g01694 353 SMART ring_2 302 342 IPR001841 -
Lapu2g01694 353 SUPERFAMILY RING/U-box 290 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01694 Lapu-Chr2 30646747 30656175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01694 2 352 C3H Transcription Factor Family AT1G68070 66.856 3.96e-174 486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01694 2 30646747 30656175 Lapu2g01694 2 30646747 30656175 ECH