Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00293 ATGGAGCTCTTCTCCTTCCTTTTCCTCGCCCTTCTCTTCCCTCTCTATCTCTATTTCGCTGCACAAAATTCCCGCAAAACCAACAACAAAGGCTTCAAACACTACCCTCTCGTCGGAACCTTACCGGAATTCCTCAAAAATCGCCATCGCTTCCTCGAATGGACCACCCAAGTCCTCCGCGACTGTCCCACCAACACCGCCGTGTTCTCTCGCCCCTACAGCGTCCACGGCGTCATAACGGCCAACCCCGACAACGTGGAACACATTCTCAAAACCCGATTCCAAAACTATCCAAAGGGCGAACGCTTCATCCACCACCTCCAAGACTTCCTCGGCAACGGAATCTTCAACTCCGACGCTGAACTCTGGAAGGTGCAGCGAAAAATCGCCAGCCACGAGTTCAGCACCAAATCACTCCGTAACTTCATTGTCAACTCCGTCACCACCGAACTCCAAACCAGGCTTCTTCCAATTCTCTCCACAGCCTCCCGGACAAACGGGGTACTCGATTTGCAGAGCCTGTTCGAGAGCTTCGCCTTCGACAACGTCTGCAAGCTAGCCTTCAACGTTGACCCCGCCTGTCTCGGGGGCGACGGCTCCGCCGGCGCCGAGTTCATGAGCGCGTTCGAGGACGCCGCCGTGCTGAGTTCAGGTAGATTCATGAGCGTGCTACCCTTCATTTGGAAAATAAAGAAGCTGTTGAACATCGGAACAGAGCGGAGACTCAGAGAATCAATCACCACCGTCCACGTGTTCGCTGAGTCGATAATACGGTCCCGATTGGAGTCCAGGGACCACACCGCCGAGGACGAAGATTTACTTTCGCGTTTCATCAGAACAGAGGAGAGCTCGGCGCAGTTTCTCCGCGACGTTGTGATAAGTTTCATTCTCGCGGGGCGTGACACGACGTCGTCCGCGCTCACCTGGTTCTTCTGGATTCTTTCTTCCAGGCCTCACGTGCGGAGAAAAATTCGCGAGGAAATCTCAAGGGTCCGGTCCGCCACGCGTGGCGTTGGCGCGTTCACGTACGAGGAGCTGAGAGAGATGCATTACTTGCATGCGGCGCTTACGGAGACGATGAGGTTGTACCCGCCGGTGCCTGTTGACTCGAAGAAATGTGTGGACGACGACATTTTGCCGGATGGAACGAGGATTGGGAAGGGGTGGTTCATATCGTACCACACGTACGCAATGGGGAGGATGGAGAGCGTGTGGGGAAAAGACTGTACCGAATATAATCCCGAAAGGTGGTTGGAGAACGGCGCATACCGAACAGAGAGTCCGTTTCGCTTTCCGGTGTTTCACGCGGGTCCTCGAATGTGTCTGGGGAAAGAAATGGCTTATATTCAGATGAAGTCCATTGCAGCTTCGGTGATGGAGAAGTTTGAGATTGAGGCAGTGGATAAGGACACGTGTCCTGAGCATGTTTTGTCTTTGACGTTGAGGATCAAAGGGGGGTTGCCAGTCAGGGTAAGAGTAAGGGATACACTATCAAGTCTGCACAGTAACACAGGGGTCTAG 1521 0.5378 MELFSFLFLALLFPLYLYFAAQNSRKTNNKGFKHYPLVGTLPEFLKNRHRFLEWTTQVLRDCPTNTAVFSRPYSVHGVITANPDNVEHILKTRFQNYPKGERFIHHLQDFLGNGIFNSDAELWKVQRKIASHEFSTKSLRNFIVNSVTTELQTRLLPILSTASRTNGVLDLQSLFESFAFDNVCKLAFNVDPACLGGDGSAGAEFMSAFEDAAVLSSGRFMSVLPFIWKIKKLLNIGTERRLRESITTVHVFAESIIRSRLESRDHTAEDEDLLSRFIRTEESSAQFLRDVVISFILAGRDTTSSALTWFFWILSSRPHVRRKIREEISRVRSATRGVGAFTYEELREMHYLHAALTETMRLYPPVPVDSKKCVDDDILPDGTRIGKGWFISYHTYAMGRMESVWGKDCTEYNPERWLENGAYRTESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASVMEKFEIEAVDKDTCPEHVLSLTLRIKGGLPVRVRVRDTLSSLHSNTGV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00293 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 Gene3D Cytochrome P450 15 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PANTHER CYTOCHROME P450 21 489 - -
Lapu1g00293 506 Pfam Cytochrome P450 31 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 CDD CYP86A 77 487 - -
Lapu1g00293 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Lapu1g00293 506 FunFam Cytochrome P450 22 497 - -
Lapu1g00293 506 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00293 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00293 Lapu-Chr1 11591413 11593365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00293 31 494 Cytochrome P450 AT3G56630 60.554 0.0 610
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00293 1 11591413 11593365 Lapu1g00293 1 11591413 11593365 ECH
Lapu3g03862 3 62190638 62192383 Lapu1g00293 1 11591413 11593365 ECH