Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0620 ATGACTTGTTGCTCTCATCTTTTCACAAAAAAAGGGTCCTTCTCAGCCACGCGATTCACAGGGATTGATATAGATATTTCAGAAATCCAGAATGTCAATTTTTACACTTACAAAGAATTGCGAGTTGCCACGAAAGGTTTTAGTCTTGCAAACAAGATAGGGCAGGGAGGTTTTGGATCAGTGTATAAGGGAAAGCTGAGAAATGGTTCTCTGGCAGCTATAAAGGTTTTATCAGCCCAATCAAGACAAGGGGTCCGCGAGTTCTTGACAGAAATCAAGGCGATTACTAGCATAGATCATGAGAATCTAGTTCAATTGTATGGATGCTGTGTGGAAGAAAATCACAGGATTTTGGTATATGGATATCTAGAAAATAACAGCCTAGCACAAACACTTCTTGGTGGAGGCCACAGTAGCATCCAATTCAGTTGGATTGTGCGGCGGAATATTTGCATTGGAATTGCCCGCGGCCTTGCCTTCCTTCACGAGGAGGTTCGTCCACATATTATTCATAGAGATATTAAAGCAAGCAATGTACTACTTGACAATGATCTCCAGCCCAAAATTTCGGATTTTGGTCTTGCAAAGTTTATTTCACCAAACTTGACACACATTAGCACATGTGTTGCTGGAACAGCTGGTTATTTGGCACCTGAGTATGCAATACGAAGTCGAGTGACAAGAAAATCAGATATATATAGTTTTGGAGTTTTACTACTAGAAATTGTTAGTGGGAGACCTAACACTAACAGACGTTTACCAGCCGAAGAACAATATCTGCTTACAAGGGCGTGGAATTTGTATGAGAAAGGAGAGCTAGAGAGTTTGGTGGATTCCTTTCTAGATGGAGATGTCAATGTAGAGGAATCAATCAAGTTTTGTAAGATTGGTCTTGTATGCACACAGGATTCGCCTCAGCTTCGGCCTCATATGTCTACTGTGCTTAAAATGCTTAATGGTGAAAAGGATGTGAATGTGAAGAACTTGACTAAACCAAGCATGATATTTGAATTTTTGGAAGCCATAGATGAAGAGAAACAGAAAGGCAAGGCTGAAATAACAAACACATCTATGTTTACTGATTCAAGGAAGCTAGATGATTCTTCATCAGGAACTGATACCTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAAGCAATTGA 1170 0.4 MTCCSHLFTKKGSFSATRFTGIDIDISEIQNVNFYTYKELRVATKGFSLANKIGQGGFGSVYKGKLRNGSLAAIKVLSAQSRQGVREFLTEIKAITSIDHENLVQLYGCCVEENHRILVYGYLENNSLAQTLLGGGHSSIQFSWIVRRNICIGIARGLAFLHEEVRPHIIHRDIKASNVLLDNDLQPKISDFGLAKFISPNLTHISTCVAGTAGYLAPEYAIRSRVTRKSDIYSFGVLLLEIVSGRPNTNRRLPAEEQYLLTRAWNLYEKGELESLVDSFLDGDVNVEESIKFCKIGLVCTQDSPQLRPHMSTVLKMLNGEKDVNVKNLTKPSMIFEFLEAIDEEKQKGKAEITNTSMFTDSRKLDDSSSGTDTSFATMTFTSIYDRSN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0620 389 CDD STKc_IRAK 53 320 - -
Lan7g0620 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lan7g0620 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lan7g0620 389 SMART serkin_6 47 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0620 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 374 - -
Lan7g0620 389 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Lan7g0620 389 Pfam Protein kinase domain 49 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0620 389 Gene3D Transferase(Phosphotransferase) domain 1 123 334 - -
Lan7g0620 389 SUPERFAMILY Protein kinase-like (PK-like) 30 333 IPR011009 -
Lan7g0620 389 PANTHER RECEPTOR-LIKE KINASE 1 374 - -
Lan7g0620 389 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0620 Lan-Chr7 4866622 4870285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0620 35 382 Receptor kinase-like Gene Family AT1G53430 49.014 1.32e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan7g0620 Pkinase 2.3e-46 CL0016