Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0580 ATGATGGACAATTCATGTTCAGATGCATCATTTTCGAATAGGTCATTAAGGAAGAAGTCTAAATTGCGGAACTACGACGAGGATGTAATGGATGAGCAATTGGTTGATGATTTGAAGAAGAAAAATAAGACACAAGAAGATATAGATAGAGAGACTGAAACCGAGGCCATGATCGCCTTCTCGCTAGGTTTCCCAATTGATGCTTTGCGTGAGGAGGAGATTAAGGCTGGGGTTGTGAAAGAATTGGGTGGTAAGGAGCAGAATGATTATATTGTTGTAAGAAATCATATATTGGCTCTGTGGAGGGAAAATGTAAAGGTATGGTTGACTAAAACACATATCAGAGAAACTGTGAGCAGTGAATGTGAACATTTGATTAATTCTGCGTATGACTTTCTTTTCTACAATGGTTATATCAATTTTGGTGTTCTGCCTTCTTTTACTTCCCAAATACCCGAGACAATTTTTGAAGGGGGTGTGATTGTTATTGGTGCTGGCCTTGCTGGGTTAGCAGCAGCACGGCAACTCTTGTCATTCGGTTACAAGGTTGCCATTTTGGAAGGCAGGGATCGTCCCGGTGGAAGGGTTTATACTAAAAAGGTGGGGCATGAGGATACTTTAGCTTTCGTGGATCTTGGTGGGAGTATTATCACTGGCATTGATGCTAATCCTTTGGCGGTTCTGGCTCGGCAACTTTGTATACCACTTCACAAAATCAGAGATAGGTGCCCTCTGTACAAGCCAAATGGGGAGCTGGTTGACAAGGAAATAGATTCACATGTGGAATCCGTATTTAATAATTTGCTTGACAGAGTTATGGAGCTGAGGCAAATTATGGGCGGCGGCTTCTCCAGAGATACTTCTCTTGGCTCAGTGTTGGAGAAACTCAAGCTTTTATATGGCGCGGTTGGAAGCGTCGATGAAAAACAGTTGCTTGAATGGCATTTTGCAAATTTGGAATATGCAAATGCGGGATGTCTTTCAAATTTATCAGCTGCCCATTGGGATCAAGATGATCCTTTTGAAATGGGTGGTGATCACTGCTTTCTTGCTGGAGGCAATGGGAGATTGATTAATGCTTTGAGTGAAGGCATTCCTATTTTTTATGGAAAGACTGTCAATACTATCAGATATGGAAACGATGGTGTCGATGTTGTCGTCGTCGGGGGCCAAGTTTTTCGTGCACAAATTGCCTTATGCACTGTGCCTCTCGGTGTTTTGAAGAAGAAATCCATCAAGTTTGAACCTGAATTGCCTTCTAGAAAGTTGGAGGCAATTGAAAGGCTGGGGTTTGGGTTGCTGAATAAAGTTGCCATGGTTTTTCCGCATGTTTTTTGGGGCGAAGATCTGGACACATTTGGATGCCTCAATGGACAAAGTCATCAACGTGGACAATTCTTCTTATTCTATAGTTACCACACTGTTTCTGGAGGCCCAACCCTTATTGCACTGGTGGCTGGTGAGGCTGCACAAACCTTTGAATCCACACATCCACATGTTTTGCTTCATCGGGTTTTGTCTGTCCTAAGAGGTATATTTGAACCTAAAGGCATCATCGTGCCCAATCCAATTCAGTCAGTTTGTACAAAATGGGGTGCCGATCCCCTTTCTTATGGTTCATACTCTCATGTTGGTGTGGGTTCTTCCGGTGGCGATTATGATATACTTGCAGAAGATGTGGGGAACCAACTATTCTTTGCTGGTGAGGCTACAAGTAGGCAATATCCAGCAACTATGCATGGTGCTTTCTTAAGTGGCTTGAGAGAAGCTTCACGCATTTACAAGTTAACTGGGTGTCCACAAAATAATCCTAGAAAGATCACACCTAAGAATATTGGACCCATCATTGATATACTGGTGGATTTATTCAAGAAACCCGATTTGGAGTTTGGGAGATTTTCTTTCATATTAGATCCTTCATCAGAAAGTCCCCACTCAATGGTGCTGCTGCGATTTCTTTACCCAGTTCCCGAACAATTGCCATTGCCGCTTTACACTATTATATCTCGGGAACAGGTGCACCAGCTGCAACGAGTCACAGGAGCAGATCAAAGTGTGCTTGAATATTTGTCAAATAACCTTGGGTTGAAGTTTATGGGAACTAGTGCTGTATGTAATGCAGCTAGCTCTTTGATAACTAGCATTACTAGCTCACGGAAATCCAAAGGGAAGAACCGGATAACTGCGGGTGGCACGGTAGGACCATAG 2208 0.4293 MMDNSCSDASFSNRSLRKKSKLRNYDEDVMDEQLVDDLKKKNKTQEDIDRETETEAMIAFSLGFPIDALREEEIKAGVVKELGGKEQNDYIVVRNHILALWRENVKVWLTKTHIRETVSSECEHLINSAYDFLFYNGYINFGVLPSFTSQIPETIFEGGVIVIGAGLAGLAAARQLLSFGYKVAILEGRDRPGGRVYTKKVGHEDTLAFVDLGGSIITGIDANPLAVLARQLCIPLHKIRDRCPLYKPNGELVDKEIDSHVESVFNNLLDRVMELRQIMGGGFSRDTSLGSVLEKLKLLYGAVGSVDEKQLLEWHFANLEYANAGCLSNLSAAHWDQDDPFEMGGDHCFLAGGNGRLINALSEGIPIFYGKTVNTIRYGNDGVDVVVVGGQVFRAQIALCTVPLGVLKKKSIKFEPELPSRKLEAIERLGFGLLNKVAMVFPHVFWGEDLDTFGCLNGQSHQRGQFFLFYSYHTVSGGPTLIALVAGEAAQTFESTHPHVLLHRVLSVLRGIFEPKGIIVPNPIQSVCTKWGADPLSYGSYSHVGVGSSGGDYDILAEDVGNQLFFAGEATSRQYPATMHGAFLSGLREASRIYKLTGCPQNNPRKITPKNIGPIIDILVDLFKKPDLEFGRFSFILDPSSESPHSMVLLRFLYPVPEQLPLPLYTIISREQVHQLQRVTGADQSVLEYLSNNLGLKFMGTSAVCNAASSLITSITSSRKSKGKNRITAGGTVGP* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0580 735 Pfam Flavin containing amine oxidoreductase 167 593 IPR002937 GO:0016491
Lan7g0580 735 ProSiteProfiles SWIRM domain profile. 49 150 IPR007526 GO:0005515
Lan7g0580 735 SUPERFAMILY Homeodomain-like 51 151 IPR009057 -
Lan7g0580 735 Pfam SWIRM domain 64 141 IPR007526 GO:0005515
Lan7g0580 735 Gene3D - 242 549 - -
Lan7g0580 735 Gene3D - 54 152 IPR036388 -
Lan7g0580 735 SUPERFAMILY FAD/NAD(P)-binding domain 160 595 IPR036188 -
Lan7g0580 735 PANTHER FLAVIN MONOAMINE OXIDASE 34 722 - -
Lan7g0580 735 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 34 722 - -
Lan7g0580 735 Gene3D - 160 592 IPR036188 -
Lan7g0580 735 SUPERFAMILY FAD-linked reductases, C-terminal domain 430 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0580 Lan-Chr7 4469285 4472374 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lan7g0580 Amino_oxidase 3.5e-89 CL0063