Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1161 ATGGCTTCCACTCTATCCACCCTCACCCTTCGTTTCCCCTCCTCTTCCACCCATTATCCTACACCCTCATCTTATCCTACGCACTCCAAACTCTACCTCCAATTCCCCTCCTCCAACTCCAACAACAGCTCCCACCGCGCCACCCACATCCGCCCAATCGCCGCCGTCTCCGCCCCAGAGAAAATCGAGAAGCTTGGAGGCGACATCTCAAGCCTCACCCTCGAAGAGGCCAAGATCCTCGTTGACTACCTCCAGGACAAGCTCGGCGTTTCCGCTGCCTCCTTCGCGCCCGTAGCTGTCGCAGCCGGACCCGGAGCAGCTGCCACCGACGCCCCCGCCGTGGTGGAAGAGAAGACAGAGTTCGACGTGGTCATTGAGGAGGTTCCGAGCAATGCGAGGATTGCAGTGATTAAGGCGGTGAGAACATTGACTAGCCTGGCGCTGAAGGAGGCGAAGGAATTGATTGAAGGGTTGCCGAAGAAATTCAAAGAAGGGATTTCGAAGGAGGAGGCAGATGATGCTAAGAAGCAGCTTGAAGCGGCTGGTGCCAAAATTGCTATTGTCTAA 567 0.5626 MASTLSTLTLRFPSSSTHYPTPSSYPTHSKLYLQFPSSNSNNSSHRATHIRPIAAVSAPEKIEKLGGDISSLTLEEAKILVDYLQDKLGVSAASFAPVAVAAGPGAAATDAPAVVEEKTEFDVVIEEVPSNARIAVIKAVRTLTSLALKEAKELIEGLPKKFKEGISKEEADDAKKQLEAAGAKIAIV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1161 188 CDD Ribosomal_L7_L12 60 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 TIGRFAM L12: ribosomal protein bL12 62 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 Pfam Ribosomal protein L7/L12 dimerisation domain 61 108 IPR008932 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 1 187 - -
Lan11g1161 188 Gene3D Single helix bin 61 116 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 Pfam Ribosomal protein L7/L12 C-terminal domain 121 187 IPR013823 GO:0003735|GO:0006412
Lan11g1161 188 Gene3D - 117 187 IPR014719 -
Lan11g1161 188 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 61 123 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 SUPERFAMILY ClpS-like 116 187 IPR014719 -
Lan11g1161 188 Hamap 50S ribosomal protein L7/L12 [rplL]. 57 188 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lan11g1161 188 PANTHER 39S RIBOSOMAL PROTEIN L12 1 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1161 Lan-Chr11 16343975 16344669 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1161 11 16343975 16344669 Lan11g1161 11 16343975 16344669 ECH