Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1073 ATGACAAACGGATCCAGAAGATCGAAGCGTAAGGCTAATCTGGAACCACCACTGAACATCAACAAGAAGCTCCGGTCGAAGCTCCCTCGCCGGAGACGGTGCCATATCTCGCCGGTGCTGATTGTTTCTTCGAAAATCAAGGTATCCGGCGAGAATACTCGTTTCTCGTTCATTTCAGTTGATTCGAGCTGTTCTTCTGACTTCGCCGGTGCCGGTGGTGAGGTATCGTGCGATTCTAGCAGAGCTTCTGCTGTTTTTGCTCGAGACGGAAGTTACAACAAATCGAAGAATAGATTAGCAAGGGAGATCGAAGTTTCTAATAAGGTTGAACGTGCTGCTGATTTGAAGAGAAATCAGAGATTCGAGAAGCGGAATGTAAATGAAGTGGAACTCTCGGAGTCTTCATGTGTGGATTCAAACTCTGGATTTCATGAACGAAGCAGGAGCTTGATTTTGAAGCTCAATAGTGGAAATGTGATTAAGAATCTTCAAGAGAATGATGAAGTTTCCGAAGCTTGCACGAAATCAGAGATAAGTAACGACGAAATATTTTCCAGCAAAAATTCAAACTCCGGCAACGGAAATTTGAATTTGAAAGTATCTTCGGAGATAAACAAAAACGATGTGATTTCAGTTTCAGTTAGTTCTGCTTTTCCTGCGACGTCGTTTGAGGATGAAAAGACGAGATGTAAGGAAAACAGAGCATCTGAATTTGAATACTCTCCAGGTTCGAAAAACGATGTCGTATCAGATCTCGCTTGCACTGAGAAACTTCAATTCTCTTACTACGACGACGAATCGGAGTACGGTTCAACTCAGGAAACTTCTTCATTCTGTGATCTTCACTCCGAGATCTTCGTTGGAAGCTCAGAGTTGGAGCTTTCAGATTACAGTCCTTCTCTGTTCATCGATTCTGGAAGCCAATTCACGCAGGGATCCGGTGAAGAAACTGAAACTCCTTCTCCAACTTATTCGTTCTTTCTTCAATACCGCAAGGAATTCTCAACACTAACTTCTCAAATCAGCAACGCTTCAAGCGTTGAAGATGAGGTTACTCTTAAGTACAAGTATGAGAGGTTCGAAGATTTGGATGACGAAGAAAGCTATCAGATGCTGAGAAAGAGAGAAAGGAAGCAAGTTTTCATGTCGAATTATGCTGAAACGTATATTTCTACAACTGAGGTCGGTGAGCTTGTGCTTCAGCAGCGCTCGCAAATGGTTCGTTGGATCACTGAGCAATCTTATCGAAAGCAGCTTCGGCCAGAGACGTTGTTTCTTGGAGTCAGCCTCCTTGACCGTTTCCTAAGCAAAGGATACTTCAAAACCAAAAGAAGCCTTCAACTTGTTGGAATAGCCTGCCTAACGTTAGCTACCAGGATTGAAGAAAACCAGCAAAATAACAGAGTGGGGCAAAAGAATTTCTACATAGGATGCAGTGTGTGCAGTAGAATTGAGGTGGTGGCTATGGAATGGATGGTGCAGGAGGTGCTCCAGTTCCAGTGTTTTCTTCCTACCATCCATAATTTCTTGTGGTTCTACCTAAAAGCCGCAAAAGCTGATGCAGTTATGGAGAAGAGGGTCAAGAACCTGTCAGTGCTGGCACTATCAGCTCATGAGCATCTATGTTACTGGCCCTCAACAGTTGCTGCAGCACTTGTAATTCTGGCTTGTTTAGAATTCAATCAAGAAGCATCCAGCAAAGTCATAGCGATCCACGTAAGATCAAAGGATGAGAATTTGCATGAATGTATGGAGAGCTTGGAGTGGTTGTTACGATTTCTATGA 1785 0.4336 MTNGSRRSKRKANLEPPLNINKKLRSKLPRRRRCHISPVLIVSSKIKVSGENTRFSFISVDSSCSSDFAGAGGEVSCDSSRASAVFARDGSYNKSKNRLAREIEVSNKVERAADLKRNQRFEKRNVNEVELSESSCVDSNSGFHERSRSLILKLNSGNVIKNLQENDEVSEACTKSEISNDEIFSSKNSNSGNGNLNLKVSSEINKNDVISVSVSSAFPATSFEDEKTRCKENRASEFEYSPGSKNDVVSDLACTEKLQFSYYDDESEYGSTQETSSFCDLHSEIFVGSSELELSDYSPSLFIDSGSQFTQGSGEETETPSPTYSFFLQYRKEFSTLTSQISNASSVEDEVTLKYKYERFEDLDDEESYQMLRKRERKQVFMSNYAETYISTTEVGELVLQQRSQMVRWITEQSYRKQLRPETLFLGVSLLDRFLSKGYFKTKRSLQLVGIACLTLATRIEENQQNNRVGQKNFYIGCSVCSRIEVVAMEWMVQEVLQFQCFLPTIHNFLWFYLKAAKADAVMEKRVKNLSVLALSAHEHLCYWPSTVAAALVILACLEFNQEASSKVIAIHVRSKDENLHECMESLEWLLRFL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1073 594 Pfam Cyclin, N-terminal domain 368 500 IPR006671 -
Lan11g1073 594 PANTHER CYCLIN-SDS 8 585 - -
Lan11g1073 594 SMART cyclin_7 408 495 IPR013763 -
Lan11g1073 594 SUPERFAMILY Cyclin-like 504 590 IPR036915 -
Lan11g1073 594 Gene3D - 392 496 - -
Lan11g1073 594 SUPERFAMILY Cyclin-like 362 500 IPR036915 -
Lan11g1073 594 ProSitePatterns Cyclins signature. 403 434 IPR006671 -
Lan11g1073 594 Gene3D - 497 593 - -
Lan11g1073 594 PIRSF Cyclin_A_B_D_E 74 275 IPR039361 -
Lan11g1073 594 PIRSF Cyclin_A_B_D_E 320 592 IPR039361 -
Lan11g1073 594 CDD CYCLIN 503 584 IPR013763 -
Lan11g1073 594 CDD CYCLIN 403 493 IPR013763 -
Lan11g1073 594 PANTHER CYCLINS 8 585 IPR039361 -
Lan11g1073 594 Pfam Cyclin, C-terminal domain 504 588 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1073 Lan-Chr11 13774990 13781320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1073 403 562 Core Cell Cycle Gene Families AT5G11300 33.735 1.04e-18 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1073 11 13774990 13781320 Lan11g1073 11 13774990 13781320 ECH