Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1072 ATGGCTTCAAGATCCTATTCAAACCTATTGGAATTGGCCTCTGGTGAGGCTGCATCATTTGGAAGCATGAAAACCAGTGTTCCAAGGATTATGACTCAACCATTGGAGAATGTATGCTATGATCAGTCTTCTTTTTCGCTTAACCGCGGCCGGATCATAATTGTTGCTAATCAGCTCCCAATTAAGGCTCATAAGGAACCTGATGGTGACAAGAATTGGAAATTCAGTTGGGATGAGAATTCACTTGTCCTCCAACTGAAAGAAGGATTAGGCAATGATGATGTTGAAGTTATCTATGTTGGATTCCTTAATGAAGAAGTCCATCCAAATGAACAAGATAAGGTTTCACAGATACTTCTTGAGTCCTTTAATTGTGTGCCAACTTTTATTCAACCTGATATGTTTACTAGTTACTTTCATGGATTCTGCAAACAATATTTGTGGCCACTGTTTCATTACATGTTGCCTTTATCACCCGAATTTGGTGGTAGGTTTGATAGGTCATTGTGGCAAGCTTATGTCTCAGTCAATAAGATCTTTGCAGATAGAATTGTGGAAGTTATTAACCCAGAAGATGATTATGTGTGGGTACATGATTATCATCTTATGGTGTTACCAACTTTCTTGAGGAGAAGATTTAATGAAGTGAGACTTGGATTCTTCCTTCATAGCCCATTCCCTTCGTCGGAAATATACAACACATTGCCTGTTAGGGAAGAGCTCTTGATAGCCCTTCTTAATTCGGACTTGATCGGGTTTCACACTTTCGATTATGCGCGACATTTCCTCGCATGTTGTAGTCGGATGCTTGGTCTTAGTTATGGATCCAAAAGAGGCTACATCGGGATTGATTATTATGGTAGGGCTATTAGCATCAAGATTATCCCTGTTGGTATTCACATGGGTCAGCTTCAGTCAGTTTTAAGCCAGTCGAAGACCGAAGAAAAAGTTCGTGAGATCGTTAGACAGTTTCCTGATCAAGGAAGGACAATGTTGCTTGGGGTGGATGACATGGATATCTTTAAGGGAATAAATTTGAAGCTATTGGCAATGGAGCAGCTTCTCATTCAGCACCCTGGGTATCAGGGAAAGGTAGTACTAGTCCAGATAGCTAATCCTCCCAGTGGACAAGGGAAAGATGTGAAAAAAATGCAAGCTGAGACAAAGGCCACGGCAAAGCGGATTAACGAAACATTTGGAAAACCCGGGTATGATCCTATTATTCTGATTGAGGAGCCACTCGATTTTTATGAGATAGTTGCTTACTATGCTGTTGCTGAGTGTTGTTTAGTCACTGCTGTAAGGGATGGAATGAATCTAATACCTTACGAATATATAATCAGCCGTCAAGGAAATGAAACCCTGGACGAAGTTCTGGGGCTAGTTCCATCCCGTAAGAAAAAAAGTATGTTAGTTGTGTCTGAGTTCATTGGTTGTTCCCCATCTTTAAGTGGAGCAATTAGAGTCAACCCGTGGAACGTTGATGCAGTAGCTGATGCGATGGAGACTGCGCTGGAAATGGCTGATTCAGAGAAACAGCTTAGCCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTTGGGTATTGGGCTCGTAGCTTCTTACAAGATTTGGAAAGGACTTGTAGTGATCATGTACATCGAAAGTGGTGTGGAATTGGGTTTGGTTTATGTTTTAGAGTTGTAGCATTTGATCCAAACTTCAGGAAGCTCGCGATGGAAGACGTAGTTTCAGCTTACAAGAGGACTACAACTAGGGTCATCCTCCTAGACTATGATGGAACACTAATGCCTCAGGCTTGCGTTGACAAGAGCCCGACCAGTAAATCTATTGAAATTCTGAATAGCTTGTGTAAAGATAAGCATAACATGGTGTTTCTTGTTAGTTCTAGAAGCCGGAAAACACTCAGCCAATGGTTTTCTCCCTGTGAGAATCTGGGAATTGCTGCGGAGCATGGATACTTTATAAGAATGAATCAAGATGCAGAATGGGAGACTTGTGTGCCTTCATTATGTTGCACTTGGAAACAAATTGCAAAGCCTATAATGCAACTTTATAACGAAACAACTGATGGATCCACAATCGAAGATAAGGAGACTGCACTTGTCTGGGACTATGAGAATACTGATCCAGATTTCGGATCATGGCAAGCCAAAGAGCTTCTTGATCACCTTGACAGTGTGCTCGCTAATGCACCAGTCACCGTCAAAAGTGGCCAGAATTATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTCGTGCCGAAACGTCTACTTTCTACCATGCAAGAGAAGGGAAAGTCACCTGATTTTTTTCTGTGCATAGGAGATGACAGGTCTGATGAAGACATGTTCGAGGAAATCGCTAAATTGATGGCTAGTCCTTCAAGCTCACCCAGAGGCGAAGTGTTTTCATGCACCGTTGGTCCTAAACCCACTATGGCAAAGTACTATCTCCATGATACTTCGGAAGTAGTGACGTTGATCAAGCTTTTAGCTTCTGTTTCAGAACAAACAAGTTTATATTAA 2535 0.4162 MASRSYSNLLELASGEAASFGSMKTSVPRIMTQPLENVCYDQSSFSLNRGRIIIVANQLPIKAHKEPDGDKNWKFSWDENSLVLQLKEGLGNDDVEVIYVGFLNEEVHPNEQDKVSQILLESFNCVPTFIQPDMFTSYFHGFCKQYLWPLFHYMLPLSPEFGGRFDRSLWQAYVSVNKIFADRIVEVINPEDDYVWVHDYHLMVLPTFLRRRFNEVRLGFFLHSPFPSSEIYNTLPVREELLIALLNSDLIGFHTFDYARHFLACCSRMLGLSYGSKRGYIGIDYYGRAISIKIIPVGIHMGQLQSVLSQSKTEEKVREIVRQFPDQGRTMLLGVDDMDIFKGINLKLLAMEQLLIQHPGYQGKVVLVQIANPPSGQGKDVKKMQAETKATAKRINETFGKPGYDPIILIEEPLDFYEIVAYYAVAECCLVTAVRDGMNLIPYEYIISRQGNETLDEVLGLVPSRKKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMETALEMADSEKQLSHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVHRKWCGIGFGLCFRVVAFDPNFRKLAMEDVVSAYKRTTTRVILLDYDGTLMPQACVDKSPTSKSIEILNSLCKDKHNMVFLVSSRSRKTLSQWFSPCENLGIAAEHGYFIRMNQDAEWETCVPSLCCTWKQIAKPIMQLYNETTDGSTIEDKETALVWDYENTDPDFGSWQAKELLDHLDSVLANAPVTVKSGQNYVEVKPQGVSKGLVPKRLLSTMQEKGKSPDFFLCIGDDRSDEDMFEEIAKLMASPSSSPRGEVFSCTVGPKPTMAKYYLHDTSEVVTLIKLLASVSEQTSLY* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1072 844 Gene3D Glycogen Phosphorylase B; 43 306 - -
Lan11g1072 844 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 841 IPR001830 GO:0003824|GO:0005992
Lan11g1072 844 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 841 - -
Lan11g1072 844 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 50 543 - -
Lan11g1072 844 Pfam Trehalose-phosphatase 590 824 IPR003337 GO:0003824|GO:0005992
Lan11g1072 844 Gene3D - 586 701 IPR023214 -
Lan11g1072 844 Gene3D - 717 843 IPR023214 -
Lan11g1072 844 CDD GT20_TPS 51 540 IPR001830 GO:0003824|GO:0005992
Lan11g1072 844 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 589 788 IPR006379 -
Lan11g1072 844 SUPERFAMILY HAD-like 587 835 IPR036412 -
Lan11g1072 844 TIGRFAM T6PP: trehalose-phosphatase 587 835 IPR003337 GO:0003824|GO:0005992
Lan11g1072 844 Gene3D Glycogen Phosphorylase B; 307 524 - -
Lan11g1072 844 Pfam Glycosyltransferase family 20 51 540 IPR001830 GO:0003824|GO:0005992
Lan11g1072 844 CDD HAD_TPP 588 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1072 Lan-Chr11 13747896 13751581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1072 1 842 Trehalose Biosynthesis Gene Families AT1G68020 72.727 0.0 1318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1072 11 13747896 13751581 Lan11g1072 11 13747896 13751581 ECH