Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0735 ATGACTAGTCCCAACATTGAGAAAATGACTTCAATTGATGCTCAGTTAAGGCTTCTAGCACCAAGGAAGGTCTCTGATGATGATAAACTTGTGGAATATGATGCTTTGTTATTGGATCGATTCCTTCACATTCTTCATGATTTGCATGGTCAAGATATTAGACAAACGGTTCAAGATTGTTATGAGCTGTCAGCTGAGTATGAAGGGAAGCATAAGGCTGAAAAATTGGAGGAACTTGGGAATATGCTAATTGGTCTTGATGCTGGAGATTCTATTGTCATTGCCAAATCATTTTCTCACATGCTTAGTTTGGCCAATTTGGCAGAAGAAGTTCAAATTGCCTACCGGAGAAGGATCAAGTTATTAAAGAAGGGTGATTTTGCTGATGAGAACTCTGCCATAACCGAGTCAGATATCGAAGAGACCTTTAAGAGGCTCGTTACCGAACTTAAGAAGTCCCCCGAGGAAGTGTTTGATGCCTTGAAGAACCAAACTGTAGATTTGGTCCTAACTGCTCATCCTACTCAGTCTATTCGTAGATCTTTGCTGCAAAAACATGGAAGGATAAGGAATTGCTTAACACAGTTGTATGCTAAAGACATAACAGCAGATGATAAGCAGGAACTTGATGAGGCTTTACAACGAGAGGTTCAAGCTGCATTTCGCACGGATGAGATACGAAGGACTCCTCCTACACCACAAGATGAGATGAGAGCAGGAATGAGCTACTTTCATGAAACAATATGGAAAGGTGTACCAAAGTTTTTGCGCCGGGTTGACACAGCTCTGAAGAACATTGGAATAAATGAGCGTGTTCCATACAACGCCCCTCTTATTCAATTCTCGTCTTGGATGGGAGGAGATCGTGACGGCATGGCTTGTGACATGTATACTAATTTCTGTCTTGCAATATATGTAACACCCGATGCAGGTAATCCCAGGGTAACTCCTGAAGTTACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATTTGTATTTCTCTCAGATAGAGGATCTAATGTTTGAGTTATCTATGTGGCGTTGCAATGACGAGCTCCGTGTTCGTGCCGATGAACTCCATAGGTCCTCAAAGAGAGAAGCAAAACATTATATTGAGTTTTGGAAACAGATTCCTCCGAATGAGCCATACCGTGTTATTCTTGGTGATGTGAGGGACAAACTGTATAATACACGTGAACGTTCTCGCCAGTTATTAGCCAATGGGACCTCTGAAATCCCTGAAGAGACAACCTTCACAAATGTTGAGCAGTTCCTGGAGCCTCTTGAACTCTGTTATAGGTCACTCTGTGCATGCGGTGACCGGCCAATAGCAGATGGAAGCCTTCTTGATTTCTTGCGGCAAGTCTCTACATTTGGACTTTCGCTTGTAAGACTTGACATCCGTCAAGAATCTGATAGGCACACCGATGTTATGGATGCAATTACAAAACACTTGGAGATTGGATCTTACCGAGAATGGTCTGAGGAACGCAGGCAGGAATGGCTCTTGTCCGAGCTCAGTGGAAAGCGCCCTCTCTTTGGCCCTGATCTTCCTAAAACAGAAGAAATTGCTGATGTCTTGGAAACGTTCAATGTCATTGCAGAACTTCCCTCTGACAATTTTGGTGCCTATATCATCTCAATGGCAACATCCCCATCGGATGTGCTTGCTGTTGAGCTTTTACAACGCGAATGTCATGTGAAGCAGCCATTAAGGGTCGTCCCATTATTTGAAAAGCTTGCTGATCTTGAGGCTGCTCCTGCTGCAGTTGCCCGGCTTTTCTCTATAGATTGGTACAGAAACCGTATCAATGGTAAGCAAGAAGTGATGATAGGATACTCAGACTCAGGAAAAGATGCAGGTCGCCTTTCTGCAGCGTGGGCACTCTACAAGGCTCAAGAAGAGCTTGTAAAGGTTGCAAAGGAGTTCGGTGTAAAGTTGGTAATGTTCCACGGCAGAGGAGGGACTGTTGGAAGAGGAGGAGGTCCTACTCATCTTGCTATATTGTCTCAGCCACCAGACACTATTCATGGCTCGCTTCGGGTAACAGTTCAAGGTGAAGTTATTGAAAAGTCATTTGGAGAGGAGCACTTATGCTTTAGGACACTTCAGCGTTTCACTGCTGCTACACTCGAGCATGGAATGCATCCACCTGTGTCACCAAAACCAGAATGGCGTGCTCTCTTGGATGAGATGGCTGTCATTGCAACAGAGGAGTATCGCTCTATTGTTTTCCAGGAGCCTCACTTTGTTGAATACTTCCGATGTGCAACTCCTGAGCTGGAGTATGGACGAATGAATATTGGCAGTCGTCCGTCAAAGCGAAAGCCGAGTGGAGGAATCGAATCACTGCGTGCTATTCCTTGGATTTTTGCTTGGACTCAAACAAGGTTTCACTTACCAGTATGGCTTGGCTTTGGGACAGCATTTAAGCATGCAATCGAGAAGGACCCAAAGAATCTCCGAATCCTTCAAGACATGTACAATCAATGGCCTTTCTTCAGGGTCAGCCTTGACTTGGTTGAGATGGTGTTTGCCAAGGGAGATCCAGGTATTGCTGCCCTATATGACAAACTCCTAGTGTCAGAAGAGTTGTTGCCATTTGGTCAGCATTTAAGGGCTACCTATGAAGAAACCAAGAGCTTTCTCCTCAAGGTTGCTGGGCACAAAGATCTTCTTGAAGGTGATCCCTACTTAAAGCAAAGACTTCGTCTTCGCGACTCATACATCACAACCCTGAATGTCTTGCAAGCGTACACGCTGAAGCGAATTCGTGATCCCGATTACCATGTGAAGTTGAGGCCACACTTGTCAAAGGACTACATGGAATCAACCAAACCAGCTGCAGAGCTAGTGAAACTTAACCCAAAAAGTGAGTATGCCCCTGGTTTGGAAGACACACTTATTTTGACAATGAAGGGTATTGCTGCCGGCATGCAAAACACTGGTTAA 2961 0.4455 MTSPNIEKMTSIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLHILHDLHGQDIRQTVQDCYELSAEYEGKHKAEKLEELGNMLIGLDAGDSIVIAKSFSHMLSLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVTELKKSPEEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLTQLYAKDITADDKQELDEALQREVQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGMACDMYTNFCLAIYVTPDAGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADELHRSSKREAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERSRQLLANGTSEIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFNVIAELPSDNFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKEFGVKLVMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEKSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALLDEMAVIATEEYRSIVFQEPHFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGTAFKHAIEKDPKNLRILQDMYNQWPFFRVSLDLVEMVFAKGDPGIAALYDKLLVSEELLPFGQHLRATYEETKSFLLKVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMESTKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0735 986 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Lal8g0735 986 Gene3D Phosphoenolpyruvate/pyruvate domain 329 464 - -
Lal8g0735 986 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 986 - -
Lal8g0735 986 Pfam Phosphoenolpyruvate carboxylase 36 291 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 Pfam Phosphoenolpyruvate carboxylase 311 986 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 986 IPR015813 GO:0003824
Lal8g0735 986 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 986 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 986 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 612 624 IPR033129 -
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 461 481 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 610 630 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 652 681 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal8g0735 986 PRINTS Phosphoenolpyruvate carboxylase signature 784 810 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0735 Lal-Chr8 5250494 5256447 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0735 8 5250494 5256447 Lal8g0735 8 5250494 5256447 ECH
Lal10g0663 10 14448718 14455760 Lal8g0735 8 5250494 5256447 LSH
Lal8g0735 8 5250494 5256447 Lal2g0513 2 3065401 3072184 PCT
Lal1g0602 1 3846060 3851976 Lal8g0735 8 5250494 5256447 PCT
Lal2g0632 2 3757259 3763295 Lal8g0735 8 5250494 5256447 PCT
Lal9g0549 9 3715922 3721726 Lal8g0735 8 5250494 5256447 PCT