Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1177 ATGCCAGTGCAACAAGAAGTCATGTGGCCTACATTAGTAGCTAGTAAGAAACTCAACAAGCCATTAGGAAGCAGAAACTTTCTAGCAGATTATGAAGGTTATGCAGAACAACCCTTATTAGGTATTACAAGTGATGACCAATCTTCTCTGAGCACTGAGTCCCTTCTTCATGATCAAAAGGACACACAAAATTATAGGGTTTTTGCCAGCACGTGGAACGTTGGTGGAATTGCACCAGATGAAGGATTGAATATAAAGGATTTATTGGACACATGCAACCAGTTCTGTGACATCTATGTACTAGGGTTTCAAGAAATTGTACCTCTAAAAGCATCAAATGTGTTGGGACCTGAAAATAGTAAGATTTCTATGAAATGGAACACAATAATCAAAGAAGCTTTGAACAAGAGGACACATCAACTATTCAATGATCAACTTGGTCATAAAAAGAATGAGGAAAGTGAAGTTCCACAAGATTTTCAGTGTATTATTAGCAGGCAAATGGTTGGTATATTGATAACTGTGTGGGTTAGGAGAGACCTTTGTCCATTCATTCAGCATCCAAGTTTCTCATGTGTTGGATGTGGCATCATGGGATTTCTAGGAAATAAGGGTTCTGTATCAGTGAGATTCATGTTACATGAAACAAGCTTCTGCTTTATATGTACTCATCTAGCTTCAGGGGGAAGAGAGGGAGATGAAAAACATAGGAATTCTAATATTGCTGAAATATTTTCAAGGACAGGGTTTCCTAAGGGCCCTCTTCTTGATTTGCCAAGGAAGATTCTTGATCATGATCATGTTATATTACTTGGAGATTTAAATTATAGAATTTCTCTACCCGAAGAAACGACACATTCACTTGTTGAAGAAAGAGATTGGGATTATTTACTAGAAAATGATCAGCTAATGATGGAGCTAAGTAGTGGAAACATGTTAAGAGGGTGGCATGAAGGAGCAATAAAATTTGCACCAACCTATAAATATTGTCCAAATTCAGACCTCTACTATGGAGGTTGTTATCATGGCAGAAAGCAAGAAAAGAAAAGAGCACCAGCATGGTGTGACAGAATAATATGGTACGGCAAGGGTTTGAATCAACTTGAGTATACTAGAAGTGAATCAAAACTATCTGACCATAGACCTGTAAAGGCATTGTTTACAGTTCAAATAAGGGTTTCAAAAGTGATCAAAAACTTGCAAAGCTTGTTTATGTCTGAGAGATTTGGACAAATTAAAACTCACTTTGAAGTTTCCCCCACTGATGATGAGTTTATATGTAAAAGTCAATCAAGTTTCAGGTTCTAA 1308 0.37 MPVQQEVMWPTLVASKKLNKPLGSRNFLADYEGYAEQPLLGITSDDQSSLSTESLLHDQKDTQNYRVFASTWNVGGIAPDEGLNIKDLLDTCNQFCDIYVLGFQEIVPLKASNVLGPENSKISMKWNTIIKEALNKRTHQLFNDQLGHKKNEESEVPQDFQCIISRQMVGILITVWVRRDLCPFIQHPSFSCVGCGIMGFLGNKGSVSVRFMLHETSFCFICTHLASGGREGDEKHRNSNIAEIFSRTGFPKGPLLDLPRKILDHDHVILLGDLNYRISLPEETTHSLVEERDWDYLLENDQLMMELSSGNMLRGWHEGAIKFAPTYKYCPNSDLYYGGCYHGRKQEKKRAPAWCDRIIWYGKGLNQLEYTRSESKLSDHRPVKALFTVQIRVSKVIKNLQSLFMSERFGQIKTHFEVSPTDDEFICKSQSSFRF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1177 435 SUPERFAMILY DNase I-like 61 392 IPR036691 -
Lal6g1177 435 SMART i5p_5 63 395 IPR000300 GO:0016791|GO:0046856
Lal6g1177 435 Gene3D Endonuclease/exonuclease/phosphatase 46 413 IPR036691 -
Lal6g1177 435 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 12 411 - -
Lal6g1177 435 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 12 411 IPR045849 GO:0004445|GO:0046855
Lal6g1177 435 Pfam Endonuclease/Exonuclease/phosphatase family 71 380 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1177 Lal-Chr6 9148231 9155059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1177 47 398 Acyl Lipid Metabolism Gene Families AT1G65580 27.861 1.38e-37 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1177 6 9148231 9155059 Lal6g1177 6 9148231 9155059 ECH