Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1099 ATGATGACTCCAAACTTGAACCTGAAACCTGAAAATAATTCAGAGTTCATCAGCCAAGTAGATTCCATTATATCCTTACATGAAACATCCTATAATCTTTCAAAGGACACTACCACTAATCCTGATTCAGGTACTATAACTTTTGACTTGACCCTCAATTTCAATCCCAATAATGAAAAGTTAAAGGGTGCAAGTGATACTAGCACTGAAAAGGGTGCTGAAGCTTTAGCATCAGCAATTCCTAGACTTTTCTCTTGTAACTATTGTTGGAGAAAGTTCTTCAGCTCACAGGCATTAGGTGGCCATCAGAATGCTCATAAAAGGGAGAGGATTATGGCTAAGCGTGCATCGCGAATCGGAATTTTCGCCGAAGAAAGGTATACAAGCTTAGCATATTTACCAGTTCAAGCTCACTCCATATTGCATAAAAAGCATATGCAATATCTGAGGTCTTCTGATATGAGAGTTGCAGCAAAATTTGAGAAAGACTGTTTTGGAAGGCTAATCTTTATGGAAGATAATAATGTAGGTCTATTTTGGCCTGGTTGTTTCAGGCAAAAAGACCAAAGGGCTAGTGTTAATTTGGGACATGAACATGCTCCAAATTTAAAGACTAGTTTTGTAGAAATGGTGCCTCATGCACAAACTTCTACTGCTACTGATCTCACTCTAAGGCTTTAA 681 0.3818 MMTPNLNLKPENNSEFISQVDSIISLHETSYNLSKDTTTNPDSGTITFDLTLNFNPNNEKLKGASDTSTEKGAEALASAIPRLFSCNYCWRKFFSSQALGGHQNAHKRERIMAKRASRIGIFAEERYTSLAYLPVQAHSILHKKHMQYLRSSDMRVAAKFEKDCFGRLIFMEDNNVGLFWPGCFRQKDQRASVNLGHEHAPNLKTSFVEMVPHAQTSTATDLTLRL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1099 226 PANTHER ZINC FINGER PROTEIN JAGGED 7 226 IPR045320 GO:0003700
Lal6g1099 226 Gene3D Classic Zinc Finger 78 132 - -
Lal6g1099 226 SUPERFAMILY beta-beta-alpha zinc fingers 82 111 IPR036236 -
Lal6g1099 226 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 226 - -
Lal6g1099 226 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Lal6g1099 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1099 Lal-Chr6 8142528 8143208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1099 82 226 C2H2 Transcription Factor Family AT1G66140 36.872 2.76e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal6g1099 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1099 6 8142528 8143208 Lal6g1099 6 8142528 8143208 ECH