Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1091 ATGGCTTCAAAATCCTTTTCAAATCTATTGGAATTGGCCTCTGGTGAGGCTCCATCATTTGGGAGCATGAAAACCAGTATTCCAAGGATTATGACTCAACCATTGGAGAATGTATGCTATGATCAGTGTTCTTTTTCGGTTAACGGCGGTGGCCGGATCATAATTGTGGCTAATCAGCTCCCTATAAAGGCTGAGAAGGAACATGATGGTGACAAGAATTGGAAATTCAGTTGGGATGAGAATTCACTTGTCCTCCAAATGAAAGATGGATTAGGCAATGATGATATTGAAGTTATCTATGTTGGATTCCTTAAGGAAGAAATCAATCCAAATGAACAAGATAAGGTTTCACAGATACTTTTTGAGTCCTTTAATTGTGTCCCAACTTTTATTCAACCTGATATGTTTACTAGTTACTTTCATGGATTCTGTAAAGAATATTTGTGGCCACTGTTTCATTACATGTTGCCTTTATCACCAGAATTTGGTGGTAGGTTTGATAGGTTAATGTGGCAAGCTTATGTCTCAGTCAATAAGATCTTTGCAGATAGAATTGTGGAAGTTATTAACTCAGAAGATGATTATGTGTGGATACATGATTATCATTTAATGGTGTTACCAACTTTCTTGAGGAGAAGATTTAATAAAGTGAGACTTGGATTCTTCCTTCATAGTCCATTCCCTTCGTCGGAAATTTACAAGACATTGCCTGTTAGGGAAGAGCTCTTGATAGCCCTTCTTAATTCAGACTTGATTGGGTTTCACACTTTCGATTATGCGCGACATTTCCTCACATGTTGTAGTCGGATGCTTGGTCTTACCTGCGGATCCAAAAGAGGCTATATTGGGATAGATTATTACGGTAGGGCTATTAGCATCAAAATTATCCCTGTTGGTATTCACATGGGTCAGCTTCAATCAATTTTAAGCCAATCAAGGACCGAAGAAAAAGTTCGTGAGATCGTTAGACAGTTTCCTGATCAAGGAAGGACAATGTTGCTTGGGGTGGATGACATGGATATCTTCAAGGGAATAAATTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGAACCCTGGGTATCAGGGAAAGGTAGTACTAGTCCAGATAGCTAATCCTCCATGTGGACAAGGGAAAGATGTGAAAGAAATGCAAGCTGAGACAAAGGCCACGGTAAAGCGGATTAATGAAACATTTGGAAAACCCGGGTATGATCCTATTATTCTGATTGAGGAGCCACTCAACTTTTATGAGATAGTTGCTTACTATGTTGTTGCTGAGTGTTGCTTAGTCACTGCTGTAAGGGATGGAATGAATCTAATACCGTATGAATATATAATAAGCCGTCAAGGAAATCAAACCCTCGATGAAGTTACGGGGCTAGCTCCATCCCTAAAGAAAAAAAGTATGTTAGTTGTGTCTGAGTTCATTGGTTGTTCCCCGTCTTTAAGTGGAGCAATCAGAGTGAACCCATGGAACATTGATGCAGTAGCTGATGCGATGGAGACTGCGCTGGAAATGGCTGATTCAGAGAAACAGATTAGCCATGAAAAGCATTACCGATATGTTAGTACTCATGATGTTGGGTATTGGGCTCGTAGCTTCTTACAAGATTTGGAAAGGACTTGTAGTGATCATGTACATAGAAAGTGGTGTGGAATTGGGTTTGGTTTATGTTTTAGAGTTGTAGCATTTGATCCAAACTTCAAGAAGCTCTCGATGGATCACGTAGTTTCAGCTTACATGAGGACTACAACTAGGGTGATCCTTCTAGACTATGATGGAACACTAATGCCTCAGGCTTGCGTTGACAAGAGCCCAACCAGTAAATCTATTGAAATTCTGAATACTTTGTGTAAAGATAAGCATAACATGGTATTTCTTGTTAGTTCTAGAAGCCGGAAAACACTCAGCCAATGGTTTTCTCGCTGTGAGAATCTGGGAATTGCTGCGGAGCATGGATACTTTGTAAGAATGAATCAAGATGCAGAATGGGAGATTTGTGTGCCTTCAACATGTTGCACTTGGAAACAAATTGCAAAGCCTATAATGCAACTTTATACCGAAACAACTGACGGATCCACAATCGAAGATAAAGAGACTGCACTTGTCTGGGAATATGAGAATACGGATCCAGATTTTGGATCATGGCAAGCCAAAGAGCTTCTTGATCACCTTGACAGTGTGCTCGCTAATGCACCAGTCACCGTCAAAAGTGGCCAGAATTATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTCGTGCCGAAACGTCTACTTTCGGCCATGCAAGAAAACGGAAAGTCACCTGATTTTGTTCTGTGTATAGGAGATGACAGGTCTGATGAAGACATGTTCGAGGAAATCGCTAAACTGATGGCTGGTCCTTCAAGCTCATCCGGGGGCGAAGTGTTTTCATGCACGGTTGGTCCGAAACCCAGTATGGCAAAGTACTATCTCCATGATACCGCGGAAGTAGCGAAGTTGATCCAGCGTTTAGCTTCTGTTTCAGAACAAACATGTTTATATTAA 2538 0.4098 MASKSFSNLLELASGEAPSFGSMKTSIPRIMTQPLENVCYDQCSFSVNGGGRIIIVANQLPIKAEKEHDGDKNWKFSWDENSLVLQMKDGLGNDDIEVIYVGFLKEEINPNEQDKVSQILFESFNCVPTFIQPDMFTSYFHGFCKEYLWPLFHYMLPLSPEFGGRFDRLMWQAYVSVNKIFADRIVEVINSEDDYVWIHDYHLMVLPTFLRRRFNKVRLGFFLHSPFPSSEIYKTLPVREELLIALLNSDLIGFHTFDYARHFLTCCSRMLGLTCGSKRGYIGIDYYGRAISIKIIPVGIHMGQLQSILSQSRTEEKVREIVRQFPDQGRTMLLGVDDMDIFKGINLKLLAMEQLLIQNPGYQGKVVLVQIANPPCGQGKDVKEMQAETKATVKRINETFGKPGYDPIILIEEPLNFYEIVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNQTLDEVTGLAPSLKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMETALEMADSEKQISHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVHRKWCGIGFGLCFRVVAFDPNFKKLSMDHVVSAYMRTTTRVILLDYDGTLMPQACVDKSPTSKSIEILNTLCKDKHNMVFLVSSRSRKTLSQWFSRCENLGIAAEHGYFVRMNQDAEWEICVPSTCCTWKQIAKPIMQLYTETTDGSTIEDKETALVWEYENTDPDFGSWQAKELLDHLDSVLANAPVTVKSGQNYVEVKPQGVSKGLVPKRLLSAMQENGKSPDFVLCIGDDRSDEDMFEEIAKLMAGPSSSSGGEVFSCTVGPKPSMAKYYLHDTAEVAKLIQRLASVSEQTCLY 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1091 845 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 789 IPR006379 -
Lal6g1091 845 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Lal6g1091 845 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 842 - -
Lal6g1091 845 SUPERFAMILY HAD-like 588 836 IPR036412 -
Lal6g1091 845 TIGRFAM T6PP: trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Lal6g1091 845 CDD GT20_TPS 52 541 IPR001830 GO:0003824|GO:0005992
Lal6g1091 845 CDD HAD_TPP 589 830 - -
Lal6g1091 845 Pfam Glycosyltransferase family 20 52 541 IPR001830 GO:0003824|GO:0005992
Lal6g1091 845 Gene3D Glycogen Phosphorylase B; 45 307 - -
Lal6g1091 845 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 51 544 - -
Lal6g1091 845 Gene3D Glycogen Phosphorylase B; 308 525 - -
Lal6g1091 845 Pfam Trehalose-phosphatase 591 825 IPR003337 GO:0003824|GO:0005992
Lal6g1091 845 Gene3D - 718 843 IPR023214 -
Lal6g1091 845 Gene3D - 587 703 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1091 Lal-Chr6 8066798 8070304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1091 1 841 Trehalose Biosynthesis Gene Families AT1G68020 72.547 0.0 1307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1091 6 8066798 8070304 Lal6g1091 6 8066798 8070304 ECH