Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1089 ATGGGGAATGATCCACCTATTCCAAAAAATAGTTCCATTCTCGTGTTTCTTCATTGTGCTCTTTTTTTCAAGCCAAAAGCATTGGCATCAAGGATGGGTAAAACAATTGAGTTATATGGATTCCCTTCTTATGTGACTACGACCAGTGTAATACAATTTGTAGAGCAATATATTGGTGAAGGAGCTGTCTTTGCTATGAAGTTAAGAAAAGGCAAAGGTCGGGTTCCAAGAGCATTTGCTATTATTCAATTTGCCTCTGCAAAAGATGCTGCAGATATGCTTTCCTTAGCTAACAACCGTGGACAAATGTTGCGGTATGGGACCTCCTATCTGAAGGCTCGGGAAGTGGAAAGAGATATTGTGCCGAAGCCAAGAACTTTTTTGCATAATTTGAACAATGTGAAATTATACTTTGGCTGTCAGATCTCAAAGGAGAAATTCTCTGTGTTATTCAAGAAGGTGGATGTCAGTGTAAAATTTGGGACTGGAATGAGAAAGTTGCATATTTTTTTGTCCAATGGTTGTGCACAATACAAATTGGAGCTTTCATATGAGAACATTTGGAAGATTGAACTGCATCAACCACGAGGTGAAACTGCAAAGTACCTCATAATTCAGTTACTTGGTGCTCCTCGGATTTTTGAGAAAGATGAGCCTACTTCGGAAAACATATATGAAAACCCTTTATTCAACTATTATAGAGACACCATTGATGACCAGTGGATTCGCACTATAGATTTCACTCCTTCCAGCTGTATTGGGCAATCTTCTGCTATATGTTTGGAGCTTCCTTATGGTCAACATTTTCCAAATCTCAAGGAAAACTTTGCTCACTATGAGTTAAGTGAGAGGCAATACACATTAGAATCAGGACTTCCTTTGTATAGAAATTCACGTCTAGCTCCCGTTGTTACTGCTCCTCAACACATTAAAATACCATATGACATCTTGTTTAAAGTTAATTCACTGGTTCAACATGGGTGCGTTGCAGGTTGTGCGCTTGATAATGACTTCTATCATTTGGTCGATCCATGTAGAATGGACCTTGCCTTTATTGAACATGCTTTAGAGAAAATGTACCATTTAAAGGAATTCTGTTATAAACCCACAAATTGGCTAACTGATCAATACAGAAGGTACCTTACATCAACGAATCCTCCCCAATCACCTTCGATATCCTTGGATAACGGGTTGGTATATGTACGCAGGGTTCAGATTACACCGTGCAAGGTGTACTTTTGTGGTCCAGAGATTAATATTTCTAATCGTGTTCTTCGCCATTTCCGTCAACATGTTGATAACTTTCTACGTGTTTCATTCGTTGATGAGGAGTTAGATAAATTGTACGCAACAGATTTATCTCCACGCACTTCTGTGAACAAGAAAACTGAAATATACAACAGAATTATTTCAATCCTTAAAAATGGTATAGATATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCGTCAAGTCAGTTACGAGAAAATTCTCTTTGGATGTTTGCTCCTGCAGCTGGGTTTACTGCTGCTAGCATAAGAGAATGGATGGGAAATTTTCGCCAGATTAAAAATGTGGCCAAGTATGCTGCTAGGTTGGGACAATCTTTTGGCTCATCTACCGAAACTCTAAATGTCAGCAGGCATGAAATTGAAGTTATTCCTGATGTGGAAGTTAAACATGGTCGAAATCACTATGTCTTCTCTGATGGAATTGGGAAGATATCTTCTGAATTTGCTAGGAAGGTGGCTGAAAAATGTGGTTATAGTTCTACCACATCTGCCTTTCAGATTCGATATGGCGGGTATAAAGGAGTTGTGGCGGTTGACCCAACTTCATCAGTGAAGTTATCACTGAGAAGGAGTATGTGCAAGTATGATTCAGATAACACAAAGTTGGATGTTTTGGCATGTAGCAAATTTCAGCCGTGTTATTTGAATAGACAGCTGATTACTCTGTTATCAACTCTTGGTGTTAAGGATCATGTTTTTGAGAAAAAGCAAACAGAAGCTGTAAATCAATTGGACAGTATGTTAACAGATTCGTTAAAGGCTCAGGAGGCTTTAGACTTGATGTCCTTTGGGGAAATCGCTAATCTTCTGAAGGAGATGCTTGTTTGTGGCTACATGCCTAGTGCTGAACCATTTCTTTCAATGATGCTGCAAACATTTAGGGCATCAAAACTGTTGGAATTGCAACTCAAAACTAGGATCTTCTTACCAAATGGAAGAGCAATGATGGGATGTCTTGATGAAACTAGAACTCTAGAATACGGTCAAGTATTTGTCCAATTTTCTGACCATAGGCTTGGGGGTTTATCTGATGATTCTTTACAGTATGGTTCAGCAAGGTCTTATGTGGTTACGGGTAAGGTAGTAGTTGCAAAAAACCCTTGCTTGCACCCTGGTGATGTGCGTGTTTTAAAGGCTGTGAATGTGCCAGCATTGTACCACATGGTGGATTGTGTTGTCTTTCCCCAAAAAGGAGGCAGACCTCATCCAAACGAGTGTTCGGGAAGTGATCTGGATGGAGACATCTACTTTGTTTGCTGGGATCCTGAGTTGATTCCACCTCGAGACGAACAACCAATGGACTATACTGCTGTACCAAGTATGGAATTGGATCACGATGTTACAATCGAGGAGGTTGAGGAGTATTTTACCAATTACATAGTCAATGACAGTCTAGGAATAATTGCTAATGCACACACTGCTTTTGCTGATAAAGAACCTAAAAAAGCAATGGCTGATCAATGTATCGAGCTTGCGAAGCTATTTTCAACAGCAGTTGACTTTCCGAAAACCGGTGTTCCGGCTGTTATACCTCCCCATCTTCATGTAAAAGAATATCCAGACTTCATGGAGAAGCCTGACAAACCCACTTATCAATCATACAATGTAATAGGAAAGCTTTTTCGGGAAGTGCAAGGAATTTCAGCAAGTGCCAATTCTATCACCGCTTTCACTCAGGAAGTGGCTAGACAGTCATATGACCTTGACATGGAAGTCGATGGCTTCATGGATTATGTTGATGATGCATTTTATCACAAAAGCAACTACGACTACAAATTAGGGAATCTGATGGACTACTATGGTATCAAAACCGAGGCCGAAATCCTTAGCGGGAATATTATGAAAATGTCGAAATCTTTCACAAAAAGAAGGGATTCAGAGGCAATTAACATGGCTGTGAGGTCCCTGAGGAAAGAAGCTCGTTCTTGGTTCAACGATAACAGCAGCAGTGCAGATTCTGATAGTGTTGATGTATATGCAAAAGCTTCTGCATGGTACTATGTTACTTATCATCATACTTATTGGGGTCGCTACAATGAAGACATGGGTAGAGGTCATTTTCTAAGCTTTCCATGGTGTATTTACCCTCACCTTATTCAAATTAAGAAGGCTTCTAGGTTGGAACAAAGCTTCAGTCTTGGCTTGCACTTGAATTGA 3450 0.3974 MGNDPPIPKNSSILVFLHCALFFKPKALASRMGKTIELYGFPSYVTTTSVIQFVEQYIGEGAVFAMKLRKGKGRVPRAFAIIQFASAKDAADMLSLANNRGQMLRYGTSYLKAREVERDIVPKPRTFLHNLNNVKLYFGCQISKEKFSVLFKKVDVSVKFGTGMRKLHIFLSNGCAQYKLELSYENIWKIELHQPRGETAKYLIIQLLGAPRIFEKDEPTSENIYENPLFNYYRDTIDDQWIRTIDFTPSSCIGQSSAICLELPYGQHFPNLKENFAHYELSERQYTLESGLPLYRNSRLAPVVTAPQHIKIPYDILFKVNSLVQHGCVAGCALDNDFYHLVDPCRMDLAFIEHALEKMYHLKEFCYKPTNWLTDQYRRYLTSTNPPQSPSISLDNGLVYVRRVQITPCKVYFCGPEINISNRVLRHFRQHVDNFLRVSFVDEELDKLYATDLSPRTSVNKKTEIYNRIISILKNGIDIGDKKFEFLAFSSSQLRENSLWMFAPAAGFTAASIREWMGNFRQIKNVAKYAARLGQSFGSSTETLNVSRHEIEVIPDVEVKHGRNHYVFSDGIGKISSEFARKVAEKCGYSSTTSAFQIRYGGYKGVVAVDPTSSVKLSLRRSMCKYDSDNTKLDVLACSKFQPCYLNRQLITLLSTLGVKDHVFEKKQTEAVNQLDSMLTDSLKAQEALDLMSFGEIANLLKEMLVCGYMPSAEPFLSMMLQTFRASKLLELQLKTRIFLPNGRAMMGCLDETRTLEYGQVFVQFSDHRLGGLSDDSLQYGSARSYVVTGKVVVAKNPCLHPGDVRVLKAVNVPALYHMVDCVVFPQKGGRPHPNECSGSDLDGDIYFVCWDPELIPPRDEQPMDYTAVPSMELDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKEPKKAMADQCIELAKLFSTAVDFPKTGVPAVIPPHLHVKEYPDFMEKPDKPTYQSYNVIGKLFREVQGISASANSITAFTQEVARQSYDLDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKRRDSEAINMAVRSLRKEARSWFNDNSSSADSDSVDVYAKASAWYYVTYHHTYWGRYNEDMGRGHFLSFPWCIYPHLIQIKKASRLEQSFSLGLHLN 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1089 1149 PANTHER RNA-DEPENDENT RNA POLYMERASE 33 1136 IPR007855 GO:0003968
Lal6g1089 1149 CDD RRM_SF 36 105 - -
Lal6g1089 1149 PANTHER RNA-DEPENDENT RNA POLYMERASE 33 1136 - -
Lal6g1089 1149 Pfam RNA dependent RNA polymerase 406 975 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1089 Lal-Chr6 8027856 8039033 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1089 6 8027856 8039033 Lal6g1089 6 8027856 8039033 ECH