Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1085 ATGACCATTGAAACACTAGTCCTCGGCGCTGGCCAAGAAGTTGGGAAGAGTTGCGTAGTTGTAACCATAAACGGGAAGCGAATCATGTTCGATTGCGGCATGCATATGGGTGAAACTGATCATCGTCGTTACCCTGATTTTCAACGCATATCTGATTCTGGCGATTTCAACAATGCTCTCTCTTGTGTTATCATCACTCATTTAGAGAAAGTTGGAGTAGCTTCGACTGTAGAAAAGATGGTACAGTCGCGCCTTAGTCACTTGGACCATGTTGGGGCGTTACCTTACTTCACTGAAGTTTGCGGGTATAGCGGACCAATTTACATGACGTACCCGACAAAAGCTTTGTCTCCTTTGATGTTGGAAGATTATCGGAAAGTGATGGTTGATCGTCGGGGCGAGGAAGAACAGTTTACTTCTGATCATATTGTCGAGTGCATGAAGAAAGTTATTGCTTTAGATCTGAGGCAGACTGTGCAAGTAGATGAAGATCTGCAGATTCGTGCCTATTATGCAGGACATGTTATTGGAGCTGCAATGTTCTATGCAAAGGTGGGAGACACTGAAATGGTTTATACAGGAGACTACAATATGACACCAGATAGACACCTTGGAGCTGCTCAAATTGACAGACTAAGACTTGACCTTCTTATAACTGAATCCACATATGCGACAACAATACGTGATTCAAGATATGCTCGTGAGAGGGAATTCCTCAAAGCTGTTCATAAATGCGTCTCTAGTGGAGGAAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTATGCATTTTGTTGGATGACTATTGGGAACGCATGAATTTGAAGGTTCCTATCTATTTCTCATCAGGTCTTGTGGATGGTGACATGTGGAGACTGGATGATGGCGGTTTAACTATTCAAGCTAACATGTATTATAAGATGCTTATTAGTTGGACAAGCCAGAAGATTAAAGATACATACTCTACACATAATGCATTTGATTTTAAGAATGTACACAATTTTGAAAGGTCTATGATAGATGCTCCTGGTCCATGTGTACTTTTTGCCACACCTGGGATGTTAAGTGGTGGATTTTCACTTGAAGTTTTTAAGCACTGGGCACCGTCAGAAAAAAACCTTGTCACTTTACCTGGGTATTGTGTGGCTGGAACAGTAGGACAAAAATTAATGTCAGGTAAGCTCACCAAAAGTGATCTAGGTCCTGATTCAGAAAAAGATATCTGTTGCCAGGTTCATCAATTGGCTTTCAGTCCTCACACCGATCATAAAGGGATTATGGATCTTGTGAAATTTCTCTCCCCCAAACATGTTATGCTAGTACATGGCGAAAAGCCTAAGATGATTTCTCTTAAAGAAAAAATTCATTCTGAATTGGGGATTCCGTGTTATTATCCTGCAAATAATGAAACCGTAAGCATTCCTTCAACTCACTATGAGAATGTTGAAACATCTGACAACTTTGTCCGAAGTTGCTCAAATCCGAACTTCAAGTTTCAGAAACGCAGTTCAGTGGACACATGTAACTCTACTTTGAGAGACGGAAACTTAATACCCGAGCTTCAAGTGAAAGATGAAAGGGTAGCAGAAGGAATTTTAGTTGTGGACAGAAACAAAAAGGCAAAGATTGTACACAAGGATGAGCTTTTGCTCACTTTGGGTGACAAATAG 1680 0.4101 MTIETLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGETDHRRYPDFQRISDSGDFNNALSCVIITHLEKVGVASTVEKMVQSRLSHLDHVGALPYFTEVCGYSGPIYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTSDHIVECMKKVIALDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVSSGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSSGLVDGDMWRLDDGGLTIQANMYYKMLISWTSQKIKDTYSTHNAFDFKNVHNFERSMIDAPGPCVLFATPGMLSGGFSLEVFKHWAPSEKNLVTLPGYCVAGTVGQKLMSGKLTKSDLGPDSEKDICCQVHQLAFSPHTDHKGIMDLVKFLSPKHVMLVHGEKPKMISLKEKIHSELGIPCYYPANNETVSIPSTHYENVETSDNFVRSCSNPNFKFQKRSSVDTCNSTLRDGNLIPELQVKDERVAEGILVVDRNKKAKIVHKDELLLTLGDK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1085 559 Gene3D - 230 424 - -
Lal6g1085 559 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 413 469 IPR011108 -
Lal6g1085 559 SMART Beta_Casp_2 262 393 IPR022712 -
Lal6g1085 559 CDD INTS11-like_MBL-fold 6 221 IPR041897 -
Lal6g1085 559 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 478 IPR036866 -
Lal6g1085 559 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 1 557 - -
Lal6g1085 559 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 1 557 - -
Lal6g1085 559 Gene3D - 8 458 IPR036866 -
Lal6g1085 559 Pfam Metallo-beta-lactamase superfamily domain 86 209 IPR001279 -
Lal6g1085 559 Pfam Beta-Casp domain 262 393 IPR022712 -
Lal6g1085 559 SMART Lactamase_B_5a 15 250 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1085 Lal-Chr6 7975761 7990650 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1085 6 7975761 7990650 Lal6g1085 6 7975761 7990650 ECH