LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal6g1083	ATGGCCGACGCTCTCTCGGTGGTTCCGGTCGCCGTGCTCCGCAACCTCGCCGATAAGCTCTACGAGAGGCGCAAGAATGCGGCTCTTGAGGTTGAGGGTATAGTGAAGCAACTTGCTGTTAATGGCGAACATGATAAGATAACCGCTGTTATCAATTTGTTAACTAACGAATTCACTTATTCACTACAAGCAAATCACCGCAAGGGAGGGTTGATAGGGTTAGCTGCTGCTACTGTTGGGTTGACCACTGAAGCTGCTCAGCATCTTGAGCAAATTGTGCCCCCGGTGCTAAATTCTTTCTCTGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAAGTTGTGAGAGGAGATTTTATTATATTCTTCAACCAGATATTTGATGCTTTATGCAAGTTATCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCACCTCTTAGATCGACTCGTGAAGGATATCGTGACTGAAAGTGATCAGTTCTGTATTGAAGAATTTATACCATTGTTGAGGGAGCGCATGAACGTATTGAATCCATATGTCCGCCAATTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTTGGTTTTCTTCCTGATTTTCTTGATGGTCTGTTTAATATGCTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAAATTAAGAACTCCCCAGTAAGGCTTCTGCTAATATTGCTACTCTTGAAGTCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTAGGTGGAGACCAGCTGGTTCCATATTATGCTGACATTCTTGGAGTCATTTTGCCTTGTATATCTGATAAGGAAGAGAAAATTAGAGTGGTTGCTCGTGAAATCAATGAAGAACTATGTGCAATCAAGGGTGATCCCTCTGAAGCATTTGATGTAGGAGCAATCCTCTCTATTGCTAGGAGGCAACTATCTAGTGAATGGGAAGCTACACGAATTGAAGCTTTGCACTGGATATCAACCCTTTTGAACAGGCATCGTACTGAGGTTTTGACTTTTTTGAATGACATATTTGACACCTTACTCAAAGCACTTTCAGATCCATCTGACGAGGTTGTGCTTCTAGTTCTTGATGTCCATGCATGCATTGCAAAAGATCCTCAGCATTTCCATCAGCTTGTTGTTTTCCTAGTGCACAATTTCCAGATAGATAATTCTCTTTTGGAGAAGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTACTTTTGAATGCTGAGAGGGTCTACCGTGAACTTTCTACAATTTTGGAAGGGGAAACTGATTTAGATTTTGCATCAATTATGGTCCAGGCTTTGAATTTGATCTTACTTACATCATCGGAATTGTCTGAGATTCGAGATCTTTTGAAACAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATATTGCTTTGTATGCTTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTATGCTTTATAGCTCAGTCTTACCAGCATGCAAGTATCGTGATCCAATCTCTGTTAGAGGAGGATATTAATCCCAAATTTTTGGTTCAGCTGGATAAATTGATTCGCTTGCTTGAAACTCCTATCTTTGCTTATCTTAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTCAAAGCATTGTATGGTATTCTAATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTAAAAACTCGTTTAAAAGTTGTTCCGTCGTGTTCTTTCAATGATGTGCAATCGAAGAGAATGCCTTCAGGGGATCCCGACCAATTTCAGAACATGTCTGATGGATCACAAATTACTGAGGATAGTCACTTTAGTAAAGATCGTGGGAGCTCACATAATGGAATAAATTTTGCTGCAAGGCTACAAGAGTTTCAGCAAATGCAGCATTTGCACCGGCTGCACTTTAAAGCACAGACGAAGCCGCACAATAAATCCATTCCATTACCAAAGGAGGCGCAAAGAGAGGAAGAACCAAGTAGACCGCAGTCTACTGACCTTAATGTTCCTCTTGCTAGATCATCAAAGAGAGGTCCAGGGATGCTACAATTATAG	2205	0.4113	MADALSVVPVAVLRNLADKLYERRKNAALEVEGIVKQLAVNGEHDKITAVINLLTNEFTYSLQANHRKGGLIGLAAATVGLTTEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFCIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPVRLLLILLLLKSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGVILPCISDKEEKIRVVAREINEELCAIKGDPSEAFDVGAILSIARRQLSSEWEATRIEALHWISTLLNRHRTEVLTFLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFHQLVVFLVHNFQIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGETDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYIALYASWCHSPMAIISLCFIAQSYQHASIVIQSLLEEDINPKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYIWLFKALYGILMLLPQQSAAFKILKTRLKVVPSCSFNDVQSKRMPSGDPDQFQNMSDGSQITEDSHFSKDRGSSHNGINFAARLQEFQQMQHLHRLHFKAQTKPHNKSIPLPKEAQREEEPSRPQSTDLNVPLARSSKRGPGMLQL	734

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal6g1083	734	Pfam	Vacuolar protein 14 C-terminal Fig4p binding	440	619	IPR021841	-
	Lal6g1083	734	ProSiteProfiles	HEAT repeat profile.	92	127	IPR021133	-
	Lal6g1083	734	MobiDBLite	consensus disorder prediction	698	712	-	-
	Lal6g1083	734	MobiDBLite	consensus disorder prediction	627	660	-	-
	Lal6g1083	734	PANTHER	PROTEIN VAC14 HOMOLOG	4	697	-	-
	Lal6g1083	734	PANTHER	TAX1 BINDING PROTEIN-RELATED	4	697	IPR026825	GO:0006661\|GO:0070772
	Lal6g1083	734	SUPERFAMILY	ARM repeat	12	554	IPR016024	-
	Lal6g1083	734	Pfam	Vacuolar 14 Fab1-binding region	65	161	-	-
	Lal6g1083	734	MobiDBLite	consensus disorder prediction	627	650	-	-
	Lal6g1083	734	MobiDBLite	consensus disorder prediction	686	734	-	-
	Lal6g1083	734	Gene3D	-	2	254	IPR011989	-
	Lal6g1083	734	Gene3D	-	255	420	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal6g1083	Lal-Chr6	7954853	7967257	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal6g1083	6	7954853	7967257	Lal6g1083	6	7954853	7967257	ECH