Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1082 ATGGAATCAAAGGCTCTTTGTTTCATAACCCACCAAGAAATCTTCAACACTGTTCTCTCTGGTGACCTTGATGGGTTGAAGATGCAGCTGGAACAGATGAACAAGGATGAATTTTCACCATCATCACTTTTTTCTGAGCTTGTTTCACTTCAGAACGATGCAGGAGAAACCATGTTGTATATAGCTGCAGAGCATGGTTTTCATGAGGTGTTTAGTTTCTTGCTCAGGTTCTGTGACTTTGAGGCTGTGAAGATCAGGTCTAAGTCTGATATGAATGCGTTTCATGTTGCAGCTAAGGGTGGCCATTTGGATATTGTGAGGGAGTTTTTGAGTACTTGGCCTGAGGTTTGTAACTTATGTGACTCCACAAACACTAGCCCTCTCTATTCAGCTGCTGTTCAAGGTCATTTAGATGTTGTGAATGCTATCTTGGATGTTGATGTCAGTTCAATGATGATAGTTCGGAAAAATGGCAAAACTGCATTGCACAATGCTGCTAGGTATGGCAACCTTCCTATTGTAAAAGCACTTATTGCCCGAAATCCCGCAATTGTCTGCATCAAAGATAGAAAGGGTCAAACTGCACTGCATATGGCTGTAAAAGGACATAGTATTTCAGCAGTCGAAGAGATATTACAAGCAGATCCTACAATATTGAACGAACGAGATAAGAAGGGTAATACAGCTCTACACATCGCTACGAGGAAAGCCCGATCACAGATAGTGATCTTTTTGTTAAGCTATACAGCTATGGATGTCAATGGCATCAATAATCAGCAGGAGACAGCATTGGATTTGGCCGATAAACTTCCATACGGAGATTCAGCTTTGGAAATCAATGAAGCCCTTGCTGAATATGGCGCCAAGCATGCCAGACATGTCGGCCGAGTGGACGAAGCCATGGAACTTAAAAGAACTGTGAGTGACATAAAGCGTGAGGTGCAGTCACAACTTAAACAGAATGAAAAAACCCGTAGACGAGTTTCTGGTATCGCTAAGGAATTGAAGAAACTTCATAGAGAGGCAGTACAAAACACCGTCAATTCTGTCACGGTCGTCTCCGTCCTTTTTGCCTCAATCGCATTCATGGCTATATTCAATCTTCCTGGTCAATACCTAATGCAAGGGCCCGAGGCAGGGAAAGGCAATATAGCAGACAAAGTTGGTTTCCGAGTTTTCTGCCTTTTGAATTCTACATCACTTTTCATTTCTCTCGCAGTTGTCGTAGTTCAAATCACTTTGGTAGCGTGGGACACGAGGGCTCAAAAGCAGGTTGTATCGGTGATTAACAAGCTAATGTGGGCTGCTTGTTCCTGCACTTGTGGAGCTTTTCTTGCATTAGCTTTCGTCGTTGTTGGAAGGGAAACATGGATGGCTATTACCATCACCCTTTTGGGAGCACCAACTCTAGTTGGGACTCTTGTATGCTTGTGCTACTTTGTTTTTAGGCAGCACTTTGGGACGTTCCGCGGTGATTCCGAGCGACAAATCAAGAGAGCGAGTGGAAGCAAATCGTTCTCGTGGTCTTACTCCGCACATATATCAGATGTCGATGAATATAATTCAGATACCAAGAAGATATATGCTCTGTAA 1593 0.4319 MESKALCFITHQEIFNTVLSGDLDGLKMQLEQMNKDEFSPSSLFSELVSLQNDAGETMLYIAAEHGFHEVFSFLLRFCDFEAVKIRSKSDMNAFHVAAKGGHLDIVREFLSTWPEVCNLCDSTNTSPLYSAAVQGHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGNLPIVKALIARNPAIVCIKDRKGQTALHMAVKGHSISAVEEILQADPTILNERDKKGNTALHIATRKARSQIVIFLLSYTAMDVNGINNQQETALDLADKLPYGDSALEINEALAEYGAKHARHVGRVDEAMELKRTVSDIKREVQSQLKQNEKTRRRVSGIAKELKKLHREAVQNTVNSVTVVSVLFASIAFMAIFNLPGQYLMQGPEAGKGNIADKVGFRVFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQVVSVINKLMWAACSCTCGAFLALAFVVVGRETWMAITITLLGAPTLVGTLVCLCYFVFRQHFGTFRGDSERQIKRASGSKSFSWSYSAHISDVDEYNSDTKKIYAL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1082 530 Gene3D - 151 309 IPR036770 -
Lal6g1082 530 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 530 - -
Lal6g1082 530 Pfam Ankyrin repeats (3 copies) 155 218 IPR002110 GO:0005515
Lal6g1082 530 Pfam Ankyrin repeats (3 copies) 59 145 IPR002110 GO:0005515
Lal6g1082 530 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 530 - -
Lal6g1082 530 ProSiteProfiles Ankyrin repeat region circular profile. 225 250 - -
Lal6g1082 530 SMART ANK_2a 225 255 IPR002110 GO:0005515
Lal6g1082 530 SMART ANK_2a 157 186 IPR002110 GO:0005515
Lal6g1082 530 SMART ANK_2a 54 82 IPR002110 GO:0005515
Lal6g1082 530 SMART ANK_2a 191 220 IPR002110 GO:0005515
Lal6g1082 530 SMART ANK_2a 123 153 IPR002110 GO:0005515
Lal6g1082 530 SMART ANK_2a 89 118 IPR002110 GO:0005515
Lal6g1082 530 Coils Coil 300 341 - -
Lal6g1082 530 Pfam Domain of unknown function 341 450 IPR026961 -
Lal6g1082 530 SUPERFAMILY Ankyrin repeat 14 287 IPR036770 -
Lal6g1082 530 ProSiteProfiles Ankyrin repeat profile. 225 258 IPR002110 GO:0005515
Lal6g1082 530 ProSiteProfiles Ankyrin repeat region circular profile. 157 181 - -
Lal6g1082 530 ProSiteProfiles Ankyrin repeat profile. 157 181 IPR002110 GO:0005515
Lal6g1082 530 Gene3D - 9 150 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1082 Lal-Chr6 7949108 7953710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1082 1 530 Miscellaneous Gene Families AT2G01680 68.224 0.0 727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1082 6 7949108 7953710 Lal6g1082 6 7949108 7953710 ECH