Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1227 ATGTCACAACAACCTTCAAAACTAGTAGTATTTGTGTTATTCATCTTCATCATAATTACCACTTTTTCTCATACTTATGCTGATGAACAAGACTTACAAGAAGTTGAAGCTTTGTTGTTGTTAAAGTTCAAGAACACTCAAGTTTCTTCTGATCCAAATAACTACCTTTCTAACTGGAAAACAACCTCAAATTCTTCATCTTCTTCTCCTTGTACATGGTATGGTGTCTCCTGCTCACATGATGGTCACGTGACATCTCTCAACTTCACCAAGTTTGGGTTACATGGTTTTCTTCACTTTCCAACACTCACTGCTTTACCCTTTTTACAACACCTTCTTCTGCATAAGAATTACTTCACTGAAAGAAACAGTAACTTCTCTGTTTCCTCTTTTTGTAGTCTTGTGACACTTGACTTGTCAAAAAACAATTTTTCTGGTAGGTTTCCATTTTCTGAACTAGTTCCATGTCATAATCTTAGTTACCTTAACCTGTCTCAGAATCTTATAACTGGAGCAGATACTATAGAAAGAAGAAAAAGTTTTGTTTTTTTTGGTGGGTCTTTGGTTCAACTTGATTTGTCTAGGAATCAGGTTTCTGAGGCTACCCTTTTGGAATACACTATTAGGAACTGTCAAAATTTGGTTTTGGTTAATTTTTCTGATAACAGAATCTCTGGTCAACTTAGTGGAACTGAAAATCTTGTTTCTTGTAGAAATTTGTCTACTTTTGACTTATCTCATAATCTGTTAAATGGAGAGATGCCAAATGGTTTTGTTGGTGATTCAATTAAGCTTTTGGATCTTTCTAACAACAATTTCTCTGGTGTGTTCTCTGGGTTTGATTTAGGCCACTGTAGGAGCCTTGTTTCATTGAATTTGTCTCATAATGCACTCTCAGGAACTGAGTTTCCATCTAGCTTTGGTAATTGTCAGGTTCTGGAGACTCTAGATGTTTCCCACAATCAGCTTAAGTTGAAGATTCCCGGGATTCTTCTTTCGGGTTTGAAGAGCTTGAGGGAATTGTTTTTGGGGCATAATCAGTTTTATGGAGAAATACCTGAAGAACTTGGAAATGCTTGTAGTTCTCTTGTGGTGCTTGATCTATCTCAGAATAAACTCTATGGTGAGTTGCCTTTGACATTTGGAAAATGCTCTTCATTACAAAGTCTTAACCTTGCGAAGAATTATTTATCCGGAGATTTCCTTAACTCGGTTGTAAGCAAACTTTCCAGTCTTAGATATCTCTATGCATCATTCAATAATATCACAGGGCCGATTCCTTTATCGCTTGCCAATTGTAAAGAGCTTCAGGTTCTTGATCTTAGTTCCAATGCCTTTACAGGCAGTATCCCTTCTGTGTTTTGTTCAACATCTAATTCTCCCCCGGCCTTGGAAAAGATACTTCTGGCTGGCAATTATCTTTCCGGGCAGGTGCCTGTAGAGCTCGGTCGCTGCGAGAATTTGAAGACAATTGATTTTAGCTTTAACAATTTGAATGGCCCAATACCCTCAGAAATTTGGTCCTTGCCTAATCTTTCGGACTTCATTATGTGGGCGAATTACCTCACTGGCGAGATACCCGAAGACATTTGTGTCAATGGAGGAAACCTTGAGACCATGATTCTCAATAACAACTTCATTTCAGGTTCCATTCCTCAGTCAATTGCTAAATGCACCAATATGATTTGGGTGTCGCTTTCGAGCAATCGAATTACTGGGGGAATACCGGCTGGTATTGGTAATCTTGATAAACTTTCTATCCTTCAATTGGGTAACAATTCACTTACTGGACTGATTCCACCGGAGATTGGGAAGTGTAGGAGTCTCATATGGTTAGACTTGACTAGCAATAACCTAACCGGTACTATCCCATCTGAGCTTGCCAATCAAGCCGGGTTGGTTATTCCAGGAAGTGTTTCGGGTAAACAGTTTGCATTTGTAAGAAATGAAGGCGGGACAAGTTGCAGGGGAGCTGGAGGGTTAGTTGAGATTGAGGATATCAGGGTAGAGAGGCTGGAAGGTTTTCCTATGATTCATTCTTGTCCGTTAACACGAATATACTCCGGTTTGACAGTTTATACCTTCGCCTATAATGGCAGCATGATCTTCCTTGATCTTTCCTACAATACCTTGTCAGGAAGTATTCCTAGAAACTTTGGTTTAATGAGCTATTTACAGGTCTTGAATATCGGACACAATAGGCTAACCGGAGCAATTCCCGACAGTTTGGGTGGTCTTAAAGCGATAGGAGTGCTCGATCTCTCTCATAATAACCTTCAGGGATTTATCCCCGGGTCATTAGGGACTCTATCTTTTCTCAGTGATCTTGATGTGTCTAATAATAACCTTACAGGCTCAATTCCTTCTGGAGGTCAGCTAACCACTTTCCCAGCATCTAGATATTTAAACAACTCTAACCTCTGTGGGGTCCCGTTGCAGCCATGTGGCACTTCGAATCACTCGGCAAGTTTTTACACTTCGAAGAAGAATCAACCTACTGAAGCTGAGATCATAATTGGCATTGTTTTCCTGCTCTTATTTATTGTTGTGCTTTTATTTGCTTTATATCGAGCGAAGAAATACAGGAAGGAGGAACAGAGAGAAAAATATATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAAATTTCCAGTTTTCCCGAGTCTCTAAGCATCAGTGTTGCCGCTTTCGACAAGCCTCTGCGTAAGTTGAAATTTGCACATCTTCTCGAGGCTACTAACGGTTTCAGTGCTGAAAGCCTGATAGGGTCTGGAGGGTTCGGTGAAGTGTATAAAGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATCCGTGTCACAAGTCAGGGAGATAGAGAGTTCATGGCTGAAATGGAAACCATCGGGAAGATTAAGCATCGAAACCTGGTTCAACTCCTTGGTTACTGTAAAATCGGAGATGAGAGGCTTCTAGTGTATGAGTACATGAGATGGGGAAGTCTAGAGACTGTTCTACATGACAGGGCCAAAGGAGGAGGTTCAAGGCTTGATTGGGCAGCAAGAAAAAAGATTGTTATAGGGTCGGCAAGAGGTCTTGCATTTCTTCACCATAGTTGCATACCTCACATTATACACCGGGATATGAAGTCTAGCAATATTCTTCTCGACGAAAATTTTGAGGCCAGAGTTTCAGATTTTGGCATGGCAAGACTGGTTGATGCCCTTGATACTCATCTCAGTGTCAGCACACTTGCGGGAACGCCAGGTTATGTACCACCAGAATACTATCAGAGTTTTAGGTGCACGGCAAAAGGCGATGTCTATAGTTACGGTGTCATATTGCTAGAGCTTTTGTCAGGGAAGAGGCCGATCAACTCTTCTGAGTTTGGCGATGACAACAATCTCGTCGGATGGTCAAAGCAGCTTCACAGAGAGAATAGAGTTAATGATATACTAGATCCTGACTTAGTTATGCAAACATCTAGCGAAACCGAACTATACCAATATTTAAGAATTGCTTTTGAGTGTCTAGATGAAAGGCCGAATCGGCGACCAACCATGATACAAGTTATGGCAATGTTTAAAGAATTTGAGGTTGACACAAATAGTGATATCTTTGATGGCTTCTCTGTGAAAAACAATGTTATTGATGAAGCATAA 3651 0.4043 MSQQPSKLVVFVLFIFIIITTFSHTYADEQDLQEVEALLLLKFKNTQVSSDPNNYLSNWKTTSNSSSSSPCTWYGVSCSHDGHVTSLNFTKFGLHGFLHFPTLTALPFLQHLLLHKNYFTERNSNFSVSSFCSLVTLDLSKNNFSGRFPFSELVPCHNLSYLNLSQNLITGADTIERRKSFVFFGGSLVQLDLSRNQVSEATLLEYTIRNCQNLVLVNFSDNRISGQLSGTENLVSCRNLSTFDLSHNLLNGEMPNGFVGDSIKLLDLSNNNFSGVFSGFDLGHCRSLVSLNLSHNALSGTEFPSSFGNCQVLETLDVSHNQLKLKIPGILLSGLKSLRELFLGHNQFYGEIPEELGNACSSLVVLDLSQNKLYGELPLTFGKCSSLQSLNLAKNYLSGDFLNSVVSKLSSLRYLYASFNNITGPIPLSLANCKELQVLDLSSNAFTGSIPSVFCSTSNSPPALEKILLAGNYLSGQVPVELGRCENLKTIDFSFNNLNGPIPSEIWSLPNLSDFIMWANYLTGEIPEDICVNGGNLETMILNNNFISGSIPQSIAKCTNMIWVSLSSNRITGGIPAGIGNLDKLSILQLGNNSLTGLIPPEIGKCRSLIWLDLTSNNLTGTIPSELANQAGLVIPGSVSGKQFAFVRNEGGTSCRGAGGLVEIEDIRVERLEGFPMIHSCPLTRIYSGLTVYTFAYNGSMIFLDLSYNTLSGSIPRNFGLMSYLQVLNIGHNRLTGAIPDSLGGLKAIGVLDLSHNNLQGFIPGSLGTLSFLSDLDVSNNNLTGSIPSGGQLTTFPASRYLNNSNLCGVPLQPCGTSNHSASFYTSKKNQPTEAEIIIGIVFLLLFIVVLLFALYRAKKYRKEEQREKYIESLPTSGSSSWKISSFPESLSISVAAFDKPLRKLKFAHLLEATNGFSAESLIGSGGFGEVYKAKLKDGCVVAIKKLIRVTSQGDREFMAEMETIGKIKHRNLVQLLGYCKIGDERLLVYEYMRWGSLETVLHDRAKGGGSRLDWAARKKIVIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVDALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPINSSEFGDDNNLVGWSKQLHRENRVNDILDPDLVMQTSSETELYQYLRIAFECLDERPNRRPTMIQVMAMFKEFEVDTNSDIFDGFSVKNNVIDEA 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1227 1216 Pfam Brassinosteroid receptor island domain 632 695 IPR045381 -
Lal3g1227 1216 SMART serkin_6 917 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1227 1216 Gene3D - 639 696 - -
Lal3g1227 1216 Gene3D Phosphorylase Kinase; domain 1 879 992 - -
Lal3g1227 1216 Gene3D Ribonuclease Inhibitor 29 172 IPR032675 -
Lal3g1227 1216 Gene3D Ribonuclease Inhibitor 184 816 IPR032675 -
Lal3g1227 1216 ProSiteProfiles Protein kinase domain profile. 917 1195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1227 1216 SMART LRR_typ_2 582 606 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 746 769 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 335 359 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 409 433 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 722 745 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 770 793 IPR003591 -
Lal3g1227 1216 SMART LRR_typ_2 285 310 IPR003591 -
Lal3g1227 1216 Pfam Leucine rich repeat 286 348 IPR001611 GO:0005515
Lal3g1227 1216 Pfam Leucine rich repeat 724 783 IPR001611 GO:0005515
Lal3g1227 1216 Pfam Leucine rich repeat 564 619 IPR001611 GO:0005515
Lal3g1227 1216 Pfam Protein kinase domain 919 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1227 1216 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 12 1209 - -
Lal3g1227 1216 SUPERFAMILY L domain-like 265 803 - -
Lal3g1227 1216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Lal3g1227 1216 PANTHER UNNAMED PRODUCT 12 1209 - -
Lal3g1227 1216 ProSitePatterns Protein kinases ATP-binding region signature. 923 946 IPR017441 GO:0005524
Lal3g1227 1216 SUPERFAMILY Protein kinase-like (PK-like) 901 1191 IPR011009 -
Lal3g1227 1216 SUPERFAMILY L domain-like 43 353 - -
Lal3g1227 1216 Gene3D Transferase(Phosphotransferase) domain 1 993 1209 - -
Lal3g1227 1216 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1227 Lal-Chr3 17782358 17786008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1227 1 1215 Receptor kinase-like Gene Family AT1G55610 60.670 0.0 1458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal3g1227 Pkinase 5.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1227 3 17782358 17786008 Lal3g1227 3 17782358 17786008 ECH