Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0635 ATGAGGGAAGAAGAAATCGAGAAGCTTCGAGGAGTAGTGAGGGATTGCGTCAGCAAGCACCTATACTCCTCCGCCATTTTCTTCGCCGACAAAGTTGCTGCCTTCACCAACGACCCCGCCGATATCTACATGCAAGCTCAGGCACTCTTCCTCGGCCGCCACTACCGCCGTGCTTTCCACCTCCTCAACGCCTCCAAGATCGTCCTCCGTGATCTCCGCTTCCGCTACCTCGCCGCTAAATGCCTTGAAGAATTGAAGGAATGGGATCAATGCCTGTCAATGTTGGGTGAGGCTAAAGTAGATGATAATGGAAATGTTTCTGACACAAAGGACTCTAATGTTATGTATTTGGATAAAGATAGCGAAGACCGTGAAATCAATATATCTTCTGCCATATGCTTTTTAAGAGGCAAGGCATATGAAGCTCTAGGAATCCGTCCCCAGGCTCGATTGTGGTACAAAGCTGCTATAAAAGCCGATCCTTTATGCTACGAGGCTTTGGAGTGTCTTATTCAAAATCACATGCTTACATGTGAGGAAGAAGCAAGCTTGATCTCCTCATTGCAATTTGGTAGTGAAGATGAATGGCTCTCATCGTTTTATTCATGTTTTATAAAGAAGTATGAGAAAGAAAATGTCATAGAAGCCAAGTTCAGAGATCTTGAGAATGGATGCAGTAAAAGCGACCACTCTAATCCTTCGTTCTCGCGCACATTGAAAACCAACACAGATCTTTTGGCCTGCAAAGCTGAATACTATCATCAGTGTGGTGAATACCAGAAATGTTTTGAGTTAACATCTGTTTTGCTCGAGAAGGATCCTTTCCATATCAAGAGCACATTAGTACACCTGGCTGCTGCAATGGAGCTTGGGCATTCAAATGAGCTATATTTGATGGCTTGCAATTTGGTGAAGGATTATCCTCAAAAGGCTTTATCATGGTTTGCCGTGGGTTGCTACTACTATTGTATTGAGAAGTATGAGCAATCCCGCCATTATTTCAGCAAGGCAACTAGTCTAGAAGAAACATTTTCCCCTGCTTGGATAGGTTATGGGAATGCTTATGCTGCCCAAGAAGAAGGTGATCAGGCTATGTCAGCTTATCGCACTGCAGCTCGGTTGTTTCCTGGGTGCCATTTACCAACTCTTTATATTGGCATGGAATGCATGCGGACTCACAGCTACAAGCTTGCTGAACAGTCTAAGGCAACTTGCCCCTCAGACCCACTTGTATATAATGAACTTGGAGTTGTTGCCTATCATATGCAAGAGTATAAAAAAGCCATTTGGTGGTTTGAGAAAACATTGGCTCTCATCCCAACTTCTTTAAGTGAAATGTGGGAGCCAACTGTAGTCAATCTTGCTCACGCATACAGAAAGTTGAAGATGTACCATGAAGCAATTTCATACTATGAGAAAGCACTTACATTATCAGCGAGTGTTAGCACTTATGCTGGTCTTGCATACACTTACCATCTACAGGATGATTTCGCTAAAGCAATTACATATTATCACAAAGCCTTGTGGACGAAGCCAGATGACCAGTTTTGCACTGAAATGTTAAGTTTGGCTCTAGTAGATGAAGCGCGGAGTGGCCTTGACCCTATTCTTGAACTCAAGTGA 1623 0.4356 MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTNDPADIYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWDQCLSMLGEAKVDDNGNVSDTKDSNVMYLDKDSEDREINISSAICFLRGKAYEALGIRPQARLWYKAAIKADPLCYEALECLIQNHMLTCEEEASLISSLQFGSEDEWLSSFYSCFIKKYEKENVIEAKFRDLENGCSKSDHSNPSFSRTLKTNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHIKSTLVHLAAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIEKYEQSRHYFSKATSLEETFSPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQSKATCPSDPLVYNELGVVAYHMQEYKKAIWWFEKTLALIPTSLSEMWEPTVVNLAHAYRKLKMYHEAISYYEKALTLSASVSTYAGLAYTYHLQDDFAKAITYYHKALWTKPDDQFCTEMLSLALVDEARSGLDPILELK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0635 540 Pfam Tetratricopeptide repeat 453 477 IPR001440 GO:0005515
Lal2g0635 540 PANTHER CELL DIVISION CYCLE 16,23,27 6 530 - -
Lal2g0635 540 SMART tpr_5 130 163 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 243 276 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 345 378 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 409 442 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 482 514 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 311 344 IPR019734 GO:0005515
Lal2g0635 540 SMART tpr_5 448 481 IPR019734 GO:0005515
Lal2g0635 540 SUPERFAMILY TPR-like 307 518 IPR011990 GO:0005515
Lal2g0635 540 Pfam Tetratricopeptide repeat 483 514 IPR019734 GO:0005515
Lal2g0635 540 SUPERFAMILY TPR-like 37 174 IPR011990 GO:0005515
Lal2g0635 540 Gene3D Tetratricopeptide repeat domain 5 527 IPR011990 GO:0005515
Lal2g0635 540 PANTHER CELL DIVISION CYCLE PROTEIN 16 HOMOLOG 6 530 - -
Lal2g0635 540 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Lal2g0635 540 ProSiteProfiles TPR repeat profile. 409 442 IPR019734 GO:0005515
Lal2g0635 540 ProSiteProfiles TPR repeat profile. 311 344 IPR019734 GO:0005515
Lal2g0635 540 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Lal2g0635 540 ProSiteProfiles TPR repeat profile. 345 378 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0635 290 513 Glycosyltransferase AT3G04240 22.609 1.31e-07 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0635 2 3792002 3800566 Lal2g0635 2 3792002 3800566 ECH