Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0630 ATGAATTGTTGCTCTAATATTTTCACAAAAAAAGGGTCTTCCTCAGCCACAGGGATTGATATAGATATTTCAGAAATTCAGAATGTCAATTTTTACACTTACAAAGAATTGCGAATTGCGACGAAAGGTTTTAGTCTTGCAAACAAGATAGGGCAGGGAGGTTTTGGATCAGTCTATAAGGGAAAGCTGAGAAATGGTTCTCTGGCAGCTATAAAGGTTTTATCAGCCCAATCAAGACAAGGGGTCCGCGAGTTCTTGACAGAAATCAAGGTTATCACTAGCATAGATCATGAGAATCTAGTTAAATTGTATGGATGCTGTGTGGAAGAAAACCACAGGATTTTGGTATATGGATATCTAGAGAATAACAGCCTAGCACAAACACTTCTCGGTGGAGGCCACAGTAGCATCCATTTCAGTTGGGTTGTGCGGCGGAATATTTGCATCGGAATTGCCCGTGGCCTTGCCTTCCTTCATGAGGACGTTCGCCCACATATTATTCATAGAGATATCAAAGCAAGCAATGTACTACTTGACAATGATCTCCAGCCCAAAATTTCAGATTTTGGCCTTGCAAAGTTTATTTCACCAAACTTGACACACATTAGCACATGTGTTGCTGGAACAGTTGGTTATTTGGCACCTGAGTATGCAATACAAAATCGAGTGACAAGAAAATCAGATATATATAGTTTTGGAGTTTTACTACTAGAAATTGTTAGCGGGAGGCCTAACACTAACAGACATTTACCGGTCAAAGAACGATATCTGCTTACAAGGGCATGGAATTTGTATGAGAAAGGAGAGCTAGAGAGTTTGGTGGATTCCTTTCTAGATGGAGAGGTCAATGTAGAGGAATCAATCAAGTTTTGTAAGATTGGTCTAGTATGCACACAGGATTCTCCTAAACTTCGGCCTCCTATGTCTAGCGTGCTTAAAATGCTTATTGGTGAAAAGGATGTCAATGTGGAGAACTTGATTAAACCAAGCATGGTATTTGAATTTTTGGAAGCCATAGATAAGGAGGAACAGAAAGGAAAGGCTGAAATAACAAACACATCTCTGTTTACTGATTCAAGGAAGCAAGATGATTCTTCATCAGGAAACGATACCTCTTTTGCTACCATGACCTTCACTTCAATATATGACCGAAGCAATTGA 1161 0.3962 MNCCSNIFTKKGSSSATGIDIDISEIQNVNFYTYKELRIATKGFSLANKIGQGGFGSVYKGKLRNGSLAAIKVLSAQSRQGVREFLTEIKVITSIDHENLVKLYGCCVEENHRILVYGYLENNSLAQTLLGGGHSSIHFSWVVRRNICIGIARGLAFLHEDVRPHIIHRDIKASNVLLDNDLQPKISDFGLAKFISPNLTHISTCVAGTVGYLAPEYAIQNRVTRKSDIYSFGVLLLEIVSGRPNTNRHLPVKERYLLTRAWNLYEKGELESLVDSFLDGEVNVEESIKFCKIGLVCTQDSPKLRPPMSSVLKMLIGEKDVNVENLIKPSMVFEFLEAIDKEEQKGKAEITNTSLFTDSRKQDDSSSGNDTSFATMTFTSIYDRSN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0630 386 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 372 - -
Lal2g0630 386 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Lal2g0630 386 Pfam Protein kinase domain 46 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0630 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lal2g0630 386 SUPERFAMILY Protein kinase-like (PK-like) 22 315 IPR011009 -
Lal2g0630 386 CDD STKc_IRAK 50 315 - -
Lal2g0630 386 Gene3D Phosphorylase Kinase; domain 1 18 119 - -
Lal2g0630 386 ProSiteProfiles Protein kinase domain profile. 44 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0630 386 Gene3D Transferase(Phosphotransferase) domain 1 120 329 - -
Lal2g0630 386 PANTHER RECEPTOR-LIKE KINASE 2 372 - -
Lal2g0630 386 SMART serkin_6 44 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0630 Lal-Chr2 3742473 3745954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0630 32 322 Receptor kinase-like Gene Family AT1G56120 54.983 1.54e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g0630 Pkinase 4.6e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0630 2 3742473 3745954 Lal2g0630 2 3742473 3745954 ECH