Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0672 ATGGTGGGGCAGAATCATTTACCAGAGGAAAGTGATAGATATTGGATTCGGGCTCTTATGAATAGCAGATTCGGGTATTGTGATGATCACCATGATCTTCGGTCTAATGAGAAGAATGTTTTCTGTATAGACTGTGAAGTTAGAATGTGTAGACACTGTAAGGAAGCTCATTCCAGTCATAGAATGTTTCAGATTTACAAGTACTCTTATCAGGATGTCTTTCGCCATTCCGAGCTGCAGAAATATTTTGACTGCTCTAAAATTCAGACTTACATATCCAATAACGAAAGGATTGTACATCTCAAACCCAGGCCTTCAATCACTAAATCTAAACCTTCTGATTTAAGCCCCGAGTCTAAATCCAAAGAAACCAACTTACCAATAAGACCAAAGACGGGTGGTACATGTAAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGTTCCATTACATGCAAGATCTCATTACATCTAGTGGAGTCTCAAAATCACTATTCACAAAGGAAGAGTTCAGAGTGCACCACAGCTCCAAAACCTGATCCTGTTGATTATACTTCGAATGATAACCATAATTCAGAACCAGAGTCATCTATATCTGAAGCTCAACCATGTGAATTGGTTGAAGTTGTGAATTTCCGAAAGCGCCCAAGAAAAAGAGCTCCTCTTCAAAGATCTCCTTTTGTTTTCACATCTTAA 705 0.3872 MVGQNHLPEESDRYWIRALMNSRFGYCDDHHDLRSNEKNVFCIDCEVRMCRHCKEAHSSHRMFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSITKSKPSDLSPESKSKETNLPIRPKTGGTCKECGKHLQDERNRFCSITCKISLHLVESQNHYSQRKSSECTTAPKPDPVDYTSNDNHNSEPESSISEAQPCELVEVVNFRKRPRKRAPLQRSPFVFTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0672 234 MobiDBLite consensus disorder prediction 102 129 - -
Lal23g0672 234 MobiDBLite consensus disorder prediction 109 128 - -
Lal23g0672 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 222 - -
Lal23g0672 234 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Lal23g0672 234 MobiDBLite consensus disorder prediction 169 203 - -
Lal23g0672 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 222 - -
Lal23g0672 234 MobiDBLite consensus disorder prediction 169 202 - -
Lal23g0672 234 Pfam PLATZ transcription factor 67 157 IPR006734 -
Lal23g0672 234 SUPERFAMILY B-box zinc-binding domain 17 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0672 Lal-Chr23 9391036 9393242 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal23g0672 PLATZ 3.5e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0672 23 9391036 9393242 Lal23g0672 23 9391036 9393242 ECH
Lal16g0970 16 6455093 6458067 Lal23g0672 23 9391036 9393242 LSH