Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0670 ATGGCTTCACTTTCTCTCCAACATCACACCAACTACTTCTTCTCCCGGGCCCTCCCGACCAGTCCCAAGCCCAAGCCCAAGCCCACATTCTCTGTCCGAATGTCCCTCCAAGAAACCGGACCCTCAATCTCCGTCGTTGGCGTCACCGGCGCCGTCGGCCAGGAGTTCCTCTCCGTCCTCTCCGATCGCGACTTCCCCTACCGCTCCATCAAAATGCTCGCCTCCAAGCGCTCCGCCGGCCGCCGCCTCACCTTCGAGGACAACGAATACGTCGTCGAGGAGCTCACGGCGGAGAGCTTCGCCGGCGTCGACATTGCCCTATTCAGCGCCGGAGGTTCAATCAGTAAGGAATTCGGCCCCATCGCTGTCCAACAAGGCACTATCGTCGTTGATAACAGTTCGGCGTTTCGTATGGATGAGAAGGTTCCGTTGGTGATTCCAGAAGTGAACCCTGAAGCTATGGAGAATATTAAGGTTGGAATGGGGAAAGGTGCTCTCATTGCTAACCCTAATTGCTCCACTATCATTTGTTTAATGGCTGCTACTCCTCTTCATCGACGTGCCAAGGTATTGCGTATGGTTGTTAGTACATATCAGGCTGCTAGCGGTGCTGGTGCTGCTGCAATGGATGAGCTTGAGCTGCAAGCTCGTGAGGTATTGGAAGGGAGATCACCAACTTGTAAAATATTCAAGCAACAGTATGCTTTTAATATATTCTCACACAATGCATCTATTCTTCCAAATGGATATAACGAAGAAGAAATGAAAATGGTTAATGAGACAAGGAAAATCTGGAATGACAAGGATGTTAAAGTAACTGCCACATGCATACGGGTTCCTGTCATGCGAGCTCATGCGGAGAGTGTGAATCTTCAATTTGAGACACCCCTTGATGAGGACACTGCAAGAGATATTCTGAAGAATGCTCCGGGTGTAGTGGTTATCGATGACCGTGAATCCAATCATTTTCCTACCCCATTGGAAGTTTCAAATAAGGATGATGTTGCAGTTGGCAGGATTCGTCAGGACTTGTCTCTGGATGGAAATCAAGGGTTGGACATATTTGTCTGTGGGGATCAAATTCGTAAGGGAGCTGCACTTAATGCAATCCAGATTGCTGAGATGTTGCTATGA 1134 0.4921 MASLSLQHHTNYFFSRALPTSPKPKPKPTFSVRMSLQETGPSISVVGVTGAVGQEFLSVLSDRDFPYRSIKMLASKRSAGRRLTFEDNEYVVEELTAESFAGVDIALFSAGGSISKEFGPIAVQQGTIVVDNSSAFRMDEKVPLVIPEVNPEAMENIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVLRMVVSTYQAASGAGAAAMDELELQAREVLEGRSPTCKIFKQQYAFNIFSHNASILPNGYNEEEMKMVNETRKIWNDKDVKVTATCIRVPVMRAHAESVNLQFETPLDEDTARDILKNAPGVVVIDDRESNHFPTPLEVSNKDDVAVGRIRQDLSLDGNQGLDIFVCGDQIRKGAALNAIQIAEMLL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0670 377 PANTHER BNAA09G26740D PROTEIN 34 377 - -
Lal23g0670 377 TIGRFAM asd_B: aspartate-semialdehyde dehydrogenase 43 376 IPR005986 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Lal23g0670 377 SMART Semialdhyde_dh_3 42 157 IPR000534 GO:0016620|GO:0051287
Lal23g0670 377 Gene3D - 43 376 - -
Lal23g0670 377 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 34 377 - -
Lal23g0670 377 Hamap Aspartate-semialdehyde dehydrogenase [asd]. 40 377 IPR012080 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Lal23g0670 377 Pfam Semialdehyde dehydrogenase, dimerisation domain 183 363 IPR012280 GO:0008652|GO:0016620|GO:0046983
Lal23g0670 377 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 171 364 - -
Lal23g0670 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 199 IPR036291 -
Lal23g0670 377 Pfam Semialdehyde dehydrogenase, NAD binding domain 43 156 IPR000534 GO:0016620|GO:0051287
Lal23g0670 377 Gene3D Dihydrodipicolinate Reductase; domain 2 172 359 - -
Lal23g0670 377 PIRSF ASA_dh 40 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0670 Lal-Chr23 9378973 9383483 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0670 23 9378973 9383483 Lal23g0670 23 9378973 9383483 ECH
Lal16g0972 16 6460987 6464287 Lal23g0670 23 9378973 9383483 LSH
Lal15g0950 15 7376061 7379564 Lal23g0670 23 9378973 9383483 LSH