Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0665 ATGGCGACAATGACGAGCTTGATTGGTCTTATCAATAAGATCCAACGCGCTTGCACTGTGTTGGGCGATCATGGAGGTGAAGGTTTGTCTCTTTGGGAAGCTCTTCCTTCTGTCGCTGTTGTTGGAGGACAGAGTTCAGGGAAATCTTCGGTGTTGGAAAGTGTGGTTGGAAGGGATTTTTTGCCTCGTGGATCTGGTATTGTTACACGGAGGCCACTAGTGCTGCAACTTCATAAGACAGAGGATGGGCAGGAATATGCTGAGTTTCTTCACATACCACGAAGGCGATTCACAGACTTCGCTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGCATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCAGCTCAGCATTTATTCTCCAAACGTTGTAAACTTAACCCTCATTGATCTTCCTGGGTTGACAAAGGTTGCAGTAGAGGGGCAAGATGAGAGTATTGTTGAAGATATCGAAAACATGGTCCGCACTTATGTTGAAAAGCCAAACTGCATTATCTTAGCTATCTCTCCCGCAAATCAAGATATTGCCACTTCAGATGCTATAAAACTTGCAAAAGAAGTTGATCCTGCAGGTGAAAGAACATTCGGAGTGGTTACAAAACTTGATCTTATGGATAAAGGAACTAATGCTGTTGATGTTCTTGAGGGAAGGTCATACAGGCTACAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTGTTGCTCGTAAGAAGGAGCGTGAGTATTTTGAGACGAGTCCTGAATATGGACATTTAGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAGCTAGTTATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAATAAGACCATCGACGAGCTTAATGCAGAATTGGACCGTATTGGCAGGCCCATTGCTGTGGACTCTGGGGCCCAACTATACACTATTTTAGAAATGTGCCGTGCATTTGACAAAGTATTTAAGGAACACCTGGATGGAGGACGTCCTGGTGGGGACAAGATATATGGAGTTTTTGACCACCAATTACCAGCTGCTTTGAAAAAACTCCCCTTCGATCGCCATCTTGCCTTAAAAAATGTCCAAAAAGTTGTCATGGAAGCTGATGGGTATCAACCCCATCTGATTGCTCCGGAGCAGGGTTATAGAAGACTAATTGATGGTTCTATCAGTTATTTCAAAGGCCCGGCTGAAGCCTCTGTGGATGCTGTCCACTTTGTGTTAAAGGAACTTGTACGGAAGTCGATTGTAGCAACTGAGGAGTTAAAAAGATTTCCAACACTTTCGAATGATATAGCAGCAGCTGCAAATGAATCGTTGGAAAAATTCCGTGAAGAAAGCAGGAAGACAGTCTTACGGTTGGTTGATATGGAATCTAGCTATCTGACTGTGGAGTTTTTCAGGAAGATTCATCTTGAGCCAGAAAAGAATCTGAATGCACCAAATGCACCAAATCGAGGTGGCTCCACTATAGACAATACTGACAATCATCTCCGGAAGATTGGATCAAATGTTAATGCATATATTGGCATGGTTTGTGAAACCCTTAAGAATTCTATACCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCAAAGAGATCATTGCTTAACCGCTTTTACATTCAAGTTGGGAGGAAGGAGAAGGAGAAATTGGGTGCCATGTTGGATGAAGATCCAGCACTTATGGAAAAGAGGGGACAATTGGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGATATTGATTCAGTAGCTTGGAAATAA 1845 0.4228 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQEYAEFLHIPRRRFTDFAAVRKEIADETDRITGKTKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQDESIVEDIENMVRTYVEKPNCIILAISPANQDIATSDAIKLAKEVDPAGERTFGVVTKLDLMDKGTNAVDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLELVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDKIYGVFDHQLPAALKKLPFDRHLALKNVQKVVMEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIVATEELKRFPTLSNDIAAAANESLEKFREESRKTVLRLVDMESSYLTVEFFRKIHLEPEKNLNAPNAPNRGGSTIDNTDNHLRKIGSNVNAYIGMVCETLKNSIPKAVVYCQVREAKRSLLNRFYIQVGRKEKEKLGAMLDEDPALMEKRGQLAKRLELYKQARDDIDSVAWK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0665 614 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lal23g0665 614 PANTHER DYNAMIN 4 614 IPR022812 -
Lal23g0665 614 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 300 IPR030381 GO:0005525
Lal23g0665 614 Pfam Dynamin GTPase effector domain 520 611 IPR003130 GO:0003924|GO:0005525
Lal23g0665 614 PANTHER BNAA09G45430D PROTEIN 4 614 - -
Lal23g0665 614 CDD DLP_1 35 300 IPR001401 GO:0003924|GO:0005525
Lal23g0665 614 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Lal23g0665 614 Gene3D - 4 309 IPR027417 -
Lal23g0665 614 Pfam Dynamin family 38 212 IPR045063 -
Lal23g0665 614 PRINTS Dynamin signature 35 53 IPR022812 -
Lal23g0665 614 PRINTS Dynamin signature 60 77 IPR022812 -
Lal23g0665 614 PRINTS Dynamin signature 132 149 IPR022812 -
Lal23g0665 614 PRINTS Dynamin signature 182 200 IPR022812 -
Lal23g0665 614 PRINTS Dynamin signature 201 217 IPR022812 -
Lal23g0665 614 PRINTS Dynamin signature 224 243 IPR022812 -
Lal23g0665 614 Pfam Dynamin central region 221 488 IPR000375 -
Lal23g0665 614 Gene3D Dynamin, middle domain 326 577 - -
Lal23g0665 614 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Lal23g0665 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 308 IPR027417 -
Lal23g0665 614 ProSiteProfiles GED domain profile. 523 614 IPR020850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0665 Lal-Chr23 9348333 9355844 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0665 23 9348333 9355844 Lal23g0665 23 9348333 9355844 ECH
Lal15g0955 15 7441208 7447808 Lal23g0665 23 9348333 9355844 LSH