Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0659 ATGTCATCACAAAACTCACCCACTGAACCCCCTCACTTCCACGCGCCACTTCTCCGTTCCCGCAACGATGGCACCTCACGCGCTCCCATCCTCGCTCTCCTTCTCGGCGGTCGACGTCGCGGTCCCTCCATGATGGTCCGAGAGACGGCGGCGCGCGAGCTAGAGGAGCGCCGTGCTGACTGGGGATACTCGAGACCGGTGGTTGCGCTTGACATGACGTGGAACATGGCGTTCGTGGTGGTTTCGGCGGTGATGCTCGGTTGCACTTTCGGAGAAAAGCCGAACGCGCCGATCCGGTTTTGGATCTGCGGTTACGCGGTGCAGTGTTTGGTTCATGTGGTGTTGGTGTGGCTGGAGTATCGGAGGAGACACGGGAGTGAATCGCGGAGGTTGAGGGATGAAGAAATTGGAAGCGAGGATGATGTCAATGATAGTGAGGATGATGATGATATTGAAGGTGGTAGCTTCAGGAATTTCTCTCGCTCAGGGTTTACAAAACGATGTGAATCATTGAATACAATGGTCTCATTCCTTTGGTGGATTGTGGGATTTTACTGGGTTGTCTCTAGTGGTGATATTCTTATGCAAGATGCTCCACGTTTGTACTGGTTGGCAGTTGTCTTTCTGGCATTTGATGTCTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCTTGCATTATTGCTATCCTCTATGCTTTTGCGGGACAGGATGGTGCATCAGAATCAGATCTAAGTGTACTCCCAAAATACAAATTTCAAATATCCAGCAATGAGGAAAAGTTTAGTGAAGGAGGTGGGTCAATGATTCCCGTGGAAACTGGCAGCGGTTACTCGGCAAATGAACGAACACTTTTACCTGAGGATGCAGAATGCTGTATATGCCTCTGTACTTACGAGGATGGAGCAGAACTCCATGCTCTTCCTTGTAACCATCATTTCCATTCTACATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCACTTTGCAAGTACAATATTCTGAAGGGAAATGAACAGGTGTGA 1062 0.4878 MSSQNSPTEPPHFHAPLLRSRNDGTSRAPILALLLGGRRRGPSMMVRETAARELEERRADWGYSRPVVALDMTWNMAFVVVSAVMLGCTFGEKPNAPIRFWICGYAVQCLVHVVLVWLEYRRRHGSESRRLRDEEIGSEDDVNDSEDDDDIEGGSFRNFSRSGFTKRCESLNTMVSFLWWIVGFYWVVSSGDILMQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAFAGQDGASESDLSVLPKYKFQISSNEEKFSEGGGSMIPVETGSGYSANERTLLPEDAECCICLCTYEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0659 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 348 IPR013083 -
Lal23g0659 353 ProSiteProfiles Zinc finger RING-type profile. 302 343 IPR001841 -
Lal23g0659 353 CDD RING-H2_PA-TM-RING 301 343 - -
Lal23g0659 353 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 353 - -
Lal23g0659 353 Pfam Ring finger domain 301 343 IPR001841 -
Lal23g0659 353 MobiDBLite consensus disorder prediction 1 22 - -
Lal23g0659 353 PANTHER TARGET OF ERK KINASE MPK-1 12 353 - -
Lal23g0659 353 SUPERFAMILY RING/U-box 292 347 - -
Lal23g0659 353 SMART ring_2 302 342 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0659 Lal-Chr23 9311454 9315335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0659 1 352 C3H Transcription Factor Family AT1G68070 67.324 3.97e-172 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0659 23 9311454 9315335 Lal23g0659 23 9311454 9315335 ECH