Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0657 ATGTCGTGGGAAGAAGAAATCGTGATGCGTGATGTCACCAATGCTGGTCTCGTTGTCACTGATCGTATTGCTCGTGAACTTTCCTCTCACCTTGACCTTGAAGAATCTCTAGAAGCTTCTAGATACACTAGCCATCCTTATTCCACTAGCCCCAAGGAGTGGCCCCCTTCAGTTGAGGTTGCAAATACCTGGGAGTTGCCCCCTGTACTCATTGAAAGATACAATGCAGCCGGCGGGGAAGGAACTGCTTTTTGTGGAATATTTCCCGAAATACGTAGGGCATGGGCATCTGTTGACAATTCATTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAATGTCCTGAATATAGTGGAGAGGAACAAGCTATTTGTGCTGTTGGTCTTGCAAAATCAAAACCTGGTGTTTTTGTTGAAGCTATCCAATACCTGTTGGTTTTAGCAACGCCTGTTGAGTTGACCTTAGTAGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCTGATCCGTTTGCTGAAGTTTCACTACTGCCATTGCCAGAATATACAGTACCGTCTGATGGGGTTACAATGACTTGCGTAGCATCTACTGATAAGGGTCGTATTTTTCTTGCTGGTCGTGATAGCCACATTTATGAGATTATCTATTCGTCTGGTTCCGGGTGGCAAAAGCGCTGCAAAAAAACCTGTATCACTGCTGGTTTAGGAAGCGTAATTTCAAGATGGGTTATTCCAAATGTATTCAATTTTTCAGCTGTTGACCCCATTGTTGGAATGGTTTTTGACAATGAGAGGCATATATTGTATGCACGAACTGAAGAGATGAAGCTTCAGGCTTATGTTCTTGGACCAAATTGTGATGGCCCATTAAAGAAAGTAGCTGAAGAAAGGAATCTTGTCAATCAGAAGGATGCCCATTATGGAGGTAGACAATCAGCGGGAACTAGACTCTCAGGTCGATCTCCAAAGCCATCTATTGTTTGCATATCACCTGTATCTTCCGTTGAGTCCAAATGGCTACATCTTGTTGCTGTTTTATCTGATGGCAGAAGGATGTACCTATCTACCTCTCCTTCTAGTGGAAGCTTGACTGGGTTCAACACCAAACATCACAAGCCTAGCTGTTTAAAGGTTGTCACAACCAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTGGTCTTACCTTTGGAGCCATGGCTCTTGCAGGTAGACCGCAGAATGAGGACCTCTCTCTGAAAGTTGAGGCAGCCCATTATTCTGCTGGAACTCTTATCCTTTCAGATGCATCACCTCCAAATATGCCTTCACTTATTGTTTTGAACGGGGATTCAAGCACACAGTCAACACCATCAGGTAATCTGGGGACAAGTATGAGGAGTTCCCGGGCATTACGAGAATCTGTATCTTCTTTACCAGTTGAAGGTCGGATGCTTTCTGTGGCAGATGTTTTACCTTTTCCAGACGCTGCAGCCACTGTGCAGTCCCTATATTCAGAAATTGAGTTTAGTGGTTATGAGAGCTCAATGGAGTCATGTGAAAGGGCGCCTGGGAAGCTTTGGGCAAGAGGAGACCTCTCAACCCAACATATATTACCAAGGAGGAGGATTGTCATCTTCAGCACAATGGGCATGATGGAAATTGTTTTTAACAGGCCACTGGACATTCTAAGGCGGCTGTTAGAGTCCAACTCTCCAAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCTGGTGAGGCAGCTGCAATGTGTCTTATGCTAGCTGCAAGAATAGCACATTCTGAAAATCTTATTAGCAATGTTATTTCTGAGAAGGCAGCTGAAGTTTTTGAGGACCCACGAGTTGTTGGAATGCCGCAACTTGAAGGCAGTAGTGCATTATCAAACACAAGAACTGCTGCTGCTGGATTTAGCATGGGGCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCGCATGAAGGGCTCTGTTTGTGTTCATCTAGATTGCTTTTCCCTCTATGGGAACTTCCTGTGATGGTTGTAAAAGGCAGTTTAGGTCCTTCAGACACGTTATCTGAAAATGGAGTAGTTCTATGCAGACTCTCTGTTGGGGCTATGCAACTCCTTGAACTCAAACTCCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTCTAGGAGATGTGAGTGGTTCCATTCTATATGGCAGTGGTTCAGCATTAGGTGCTGGTGACCGAAATATGGTAATAAACTTATTTGGTGCATATTCCAGAAATGCAGAGTCTAATGGCAGCGGAACAACTAATAAAAGGCAAAGGTTGCCATATAGTCCTGCAGAATTAGCAGCCATGGAGGTGAGGGCAATGGAATGCATTAGGCAGTTACTTCTTAGATCTAGTGAAGCCCTGTTTTTGCTTCAACTTCTTTCGCAGCATCATGTCACTCGACTGATTCAGGGATTTGATGCTAACCTTCAACAAACATTAGTTCAGTTAACATTTCGTCAACTAGTTTGTTCCGAGGATGGTGACAGCCTTGCAACAAGACTTATATCTGTTCTAATGGAGTATTATACTGGTCCTGATGGCAGGGGGACTGTAGAGGATATCAGTAGGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAAGATTCCGATTACAAGTTCTTCTTAGCTGTGGAAGCTCTGGAGAGAGCAGCTGTGACTATAGATGCTGAGGAAAAGGAGAATCTTTCAAGGGAAGCATTTAATTCCTTAAGTAAAGTTCCAGAATCTACAGACTTAAGAACTGTTTGCAAACGTTTTGAAGATTTAAGATTTTATGAAGCTGTAGTGCGTCTACCTCTTCAAAAGGCACAGGCTCTCGACCCTGCAGGCGATGCTTATAATGATGAAATTGATGCAACTGCCAGAGAACAAGCACTTTCTCAGCGCGAACAATGCTATGAGATAATTATCAGGGCTTTGCGGTCTCTGAAGGGTGACACTTCCCAGAGGGAATTTGGCTCTCCCATCAGATCTGCTACTTCAGAATCTTTTCTTGATCCTGCCTCTCGGAAAAAATACATATGCCAGATTGTCCAGCTTGGTGTCCAATCTCCTGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATTGATTTAGGTCTTGAGAATGAATTGTTAGAGTATGGAGGTCCTGATCTATTGCCTTTCTTGCAAAGTGCTGGACGTAGACCTATACACGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAGTGGGGCATTCAGGAGCACCTATGACTTCTACTGAAGTCAAATATTATGAACTTTTGGCACAGTATTATGTCTTGAAGCGGCAACATGTGCTTGCTGCTCATGCATTGCTAAGGCTAGCTGAAAGGCGCTCTATTGGTGGAGTTCCTAATCTGGAACAAAGGTGTCAATACCTAAGTAATGCGGTAATACAGGGAAAAAACGCAAATGATAGTGATGGGTTGGTAGGTTCTAGTCGGAGTTCCATTGATGGTGGATTCCTAGACTTGCTTGAAGGGAAGCTTGCTGTTCTTCGATTTCAGATGAAAATCAAAGAGGAATTGGAGGCTACGGCCTTGAGGTCTGAGCCTAGCATGTCTGATTCCATGGAAACTGGTTTATTTCCTGAGGACAGTTCAACTACTAATATTGATTTTGCAAATGCAACACGTGAGAAGGCCAAAGAGCTATCATCAGATGTAAAGAGCATAACACAGTTATATAATGAATATGCTGTTCCCTTTGAGCTCTGGGAAATATGCCTGGAAATGCTGTACTTTGCCAATTATTCTGGTGGTGCTGACAGCAACGTTGTCAGAGAAACATGGGCTAGACTTATTGATCAAGCTATTTCAAGAGGCGGCATTGCTGAAGCTTGCTCAGTAGTAAAGAGGGTCGGGCCCCACATTTATCCAGGTGATGGAGGTATTTTACCACTTGACGCTATCTGTCTTCATCTAGAGAAGGCTGGACTGGAGAGGCTAAATTCAGGAGTTGAAACCGTTGGAGATGAAGATGTTGCAAGATCTCTTCTTGGTGCTTGTAAGGGTGCAGCTGAACCTGTATTGAACACATATGATCAACTTTTTTCAATTGGAGCTATCTTGTCTTCACCAAATCTTAGATTACGTATGCTGAGGTCCGTCCTTGTGGTACTCCGTGAGTGGGCCATGTCTGTATATTCACAGAGGGTGGTTACCGGTGCCACTGGGTCTCCCCTAATACTTGGTGGAGGATTCTCATTGGAACGAACAGCTGCTAGCCAAGGAGTTCGGGATAAGATAACTAGTTCTGCAAACCGGTATATGACTGAAGTGAGGAGGTTAGCCCTTCCACAGAACCAAACAGATGTTGTCTACAGAGGCTTTAGAGAACTTGAAGAGTCCCTTATAAGTCCTCATTCATTTGATCGATTTTGA 4452 0.4409 MSWEEEIVMRDVTNAGLVVTDRIARELSSHLDLEESLEASRYTSHPYSTSPKEWPPSVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELTLVGVCCSGGADGSDPFAEVSLLPLPEYTVPSDGVTMTCVASTDKGRIFLAGRDSHIYEIIYSSGSGWQKRCKKTCITAGLGSVISRWVIPNVFNFSAVDPIVGMVFDNERHILYARTEEMKLQAYVLGPNCDGPLKKVAEERNLVNQKDAHYGGRQSAGTRLSGRSPKPSIVCISPVSSVESKWLHLVAVLSDGRRMYLSTSPSSGSLTGFNTKHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPQNEDLSLKVEAAHYSAGTLILSDASPPNMPSLIVLNGDSSTQSTPSGNLGTSMRSSRALRESVSSLPVEGRMLSVADVLPFPDAAATVQSLYSEIEFSGYESSMESCERAPGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIAHSENLISNVISEKAAEVFEDPRVVGMPQLEGSSALSNTRTAAAGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGSLGPSDTLSENGVVLCRLSVGAMQLLELKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGSGSALGAGDRNMVINLFGAYSRNAESNGSGTTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSSEALFLLQLLSQHHVTRLIQGFDANLQQTLVQLTFRQLVCSEDGDSLATRLISVLMEYYTGPDGRGTVEDISRRLREGCPSYYKDSDYKFFLAVEALERAAVTIDAEEKENLSREAFNSLSKVPESTDLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNDEIDATAREQALSQREQCYEIIIRALRSLKGDTSQREFGSPIRSATSESFLDPASRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRRPIHEVRAVTATTSPVGHSGAPMTSTEVKYYELLAQYYVLKRQHVLAAHALLRLAERRSIGGVPNLEQRCQYLSNAVIQGKNANDSDGLVGSSRSSIDGGFLDLLEGKLAVLRFQMKIKEELEATALRSEPSMSDSMETGLFPEDSSTTNIDFANATREKAKELSSDVKSITQLYNEYAVPFELWEICLEMLYFANYSGGADSNVVRETWARLIDQAISRGGIAEACSVVKRVGPHIYPGDGGILPLDAICLHLEKAGLERLNSGVETVGDEDVARSLLGACKGAAEPVLNTYDQLFSIGAILSSPNLRLRMLRSVLVVLREWAMSVYSQRVVTGATGSPLILGGGFSLERTAASQGVRDKITSSANRYMTEVRRLALPQNQTDVVYRGFRELEESLISPHSFDRF 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0657 1483 Gene3D - 531 883 - -
Lal23g0657 1483 Pfam Nup133 N terminal like 54 543 IPR014908 -
Lal23g0657 1483 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 872 1290 IPR007187 -
Lal23g0657 1483 PANTHER BNAC05G49530D PROTEIN 2 1480 - -
Lal23g0657 1483 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1480 IPR004870 GO:0005643|GO:0006913|GO:0017056
Lal23g0657 1483 Gene3D Nucleoporin, helical domain, central subdomain 1057 1154 IPR042537 -
Lal23g0657 1483 Gene3D - 1180 1416 IPR042538 -
Lal23g0657 1483 Gene3D - 894 1054 IPR042533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0657 Lal-Chr23 9291707 9302504 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0657 23 9291707 9302504 Lal23g0657 23 9291707 9302504 ECH
Lal16g0982 16 6531628 6543478 Lal23g0657 23 9291707 9302504 LSH