Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0656 ATGGCTGACACTCTCACGGTGATTCCGGCAGCCGTACTCCGCAACCTTGCTGATAAGCTTTATGAGAAGCGAAAGAATGCTGCTCTTGACGTTGAAGGGATAGTGAAGCAGCTTGCTAGTAATGGGGAACATCATAAAATAACTGCTGTTATCAAATTGTTGACCACTGAATTCACTATTTCATCACAAGCAAATCACAGGAAGGGAGGATTGATAGGATTAGCTGCAGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTTTTAAGTTCTTTCTCCGACCAAGATAGCAGAGTTCGTTATTATGCTTGCGAAGCACTGTATAACATAGCTAAGGTTGTGAGAGGGGACTTTATTATATTCTTCAACCAGATCTTTGATGCCTTGTGCAAGCTGTCCGCAGACTCAGACGTCAATGTACAAAGTGCTGCTCACCTCTTAGATCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTACGGGAGCGCATGAATGTATTAAATCCATTTGTCCGCCAGTTTTTGGTTGGATGGATAACTGTGTTGGACAGTGTCCCAGATATTGATATGCTTGGCTTTCTTCCTGATTTTCTCGATGGTTTGTTTAATATGTTGAGTGATTCTAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAGATTAAGAACTCACCGGTAAGGCTCCTGTTGCTACTCTTGAAGTCTGTAGATTATGGCCGAATGGCTGAAATATTGGTACAGAGGGCAGGTTCTCCAGATGAATTTACAAGGTTAACAGCAATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTACGCGGTCATTCTTGCAGCCATTTTGCCTTGCATATCAGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGAGCCATCAAGGCTGATTTGGCTGAATCGTTTGATGTAGAAGCAGTCCTCTCAATTGCTAGGAGGTGTAGTTTTTCTGACCTGGGAAAAGTGGCTAGGCAAATATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCTACCCTTTTAATCAGATATCGTACCGAGGTTTTGCAATTTCTTGATGACATATTCGACACCCTACTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTGCTTCTAGTTCTTGATGTTCATGCATGCATTGCGAAAGATCCTCAACACTTTCGGCAGCTTGTTGTTTTCCTGGTACACAATTTCCGAGTTGACAATTCCCTTTTGGAGAAGCGTGGTGCTTTGATAATTCGTCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTTTACCGCGAACTTTCCACAATACTTGAAGGGGAATCTGATTTGGATTTTGCATCACTTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATGGGAGCTCTCTGAAATTCGAGATCTTTTGAAGCAAGCGTTGGTAAATCCCGCGGGGAAGGATTTATACGTTTCTTTGTACGCCTCATGGTGCCATTCTCCAATGGCAATTTTAAGTCTTTGCTTATTATCTCAGACTTACCAGCATGCAAGTGCTGTGATTCATTCTCTGGAAGAAGAGGATATTAATACCAAATTTTTAGTCCAGCTGGATAAATTGATTCGCTTGCTGGAGACTCCAACCTTCACTTGTCTTAGATTGCAGCTTCTTGAACCTGAAAGATATATATGGTTGTTCAAAACATTATATGGTCTACTGATGTTGCTTCCACAGCAAAGCCCTGCTTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCATATCCTTTCAATGGTGAGCAATTGAAGAGAGCACCCTCAGGGAATCCCTACCAATTTCTTCATCACAGTGAGGATGGTAACATAACTGTGGATGGTGGAAACTCACATAATGGTATAAATTTTGGTGCGAGGCTGCAACAGTTTAAGCAAATGCAGCACCAGCAACATGTGCATTGGAAAGCACAGGCACTGTCAAACAAAACTTCCATGTCATTACCAAAGCACTATATGCAGGTTGCACAAAGACAGGAAGAACCACAATTGAGTGATGTTGCTACTTCAAGATCATCAAAGAGAGGCCCGGGGTAG 2199 0.4193 MADTLTVIPAAVLRNLADKLYEKRKNAALDVEGIVKQLASNGEHHKITAVIKLLTTEFTISSQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLSSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDVNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPFVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPVRLLLLLLKSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYAVILAAILPCISDKEEKIRVVARETNEELRAIKADLAESFDVEAVLSIARRCSFSDLGKVARQISSEWEATRIEALHWISTLLIRYRTEVLQFLDDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASLMVQALNLILLTSWELSEIRDLLKQALVNPAGKDLYVSLYASWCHSPMAILSLCLLSQTYQHASAVIHSLEEEDINTKFLVQLDKLIRLLETPTFTCLRLQLLEPERYIWLFKTLYGLLMLLPQQSPAFKILKTRLKAVPSYPFNGEQLKRAPSGNPYQFLHHSEDGNITVDGGNSHNGINFGARLQQFKQMQHQQHVHWKAQALSNKTSMSLPKHYMQVAQRQEEPQLSDVATSRSSKRGPG 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0656 732 PANTHER TAX1 BINDING PROTEIN-RELATED 5 705 IPR026825 GO:0006661|GO:0070772
Lal23g0656 732 PANTHER PROTEIN VAC14 HOMOLOG 5 705 - -
Lal23g0656 732 MobiDBLite consensus disorder prediction 708 732 - -
Lal23g0656 732 Gene3D - 255 436 IPR011989 -
Lal23g0656 732 SUPERFAMILY ARM repeat 4 555 IPR016024 -
Lal23g0656 732 Pfam Vacuolar protein 14 C-terminal Fig4p binding 449 628 IPR021841 -
Lal23g0656 732 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lal23g0656 732 Gene3D - 2 254 IPR011989 -
Lal23g0656 732 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0656 Lal-Chr23 9277661 9286410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0656 23 9277661 9286410 Lal23g0656 23 9277661 9286410 ECH
Lal15g0959 15 7484070 7492859 Lal23g0656 23 9277661 9286410 LSH