Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0653 ATGATTTGCTTGGTATCTCGTTCAGGAAGGGAGTTGCAGAGATACAACAACATGGGTGGCCGTCAAGTTGTTGGATGCATACCTTATAGATATAAAGAAGACATGGATGGTAATATGAGCAACGAAATAGAATTACTAGTGGTTAGTTCACAAAAAGGTCAAGCATTGATGTTCCCAAAAGGAGGATGGGAAATTGATGAATCCTTAGAAGAAGCAGCTTGTAGGGAGTCCCTTGAAGAAGCAGGAGTCATAGGAATCGTTGAGTGTACATTGGGACAATGGAATTTCATTAGTAAAAGACATGGCATATACTATGAAGGGCACATGTTCCCCTTGTTTGTCAAAGAACAACTTGATCAATGGCCAGAGAAAAATTTAAGGAGAAGAATTTGGATGACTGTTGCACAAGCCAGAGAAGCTTGTCAGCATTGGTGGATGAAGGAAGCATTAGATATATTGGTTAAACGACTCATGTCTCCTCAGCAATGGAAAGATATTAGCATAAGTTGA 510 0.398 MICLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDMDGNMSNEIELLVVSSQKGQALMFPKGGWEIDESLEEAACRESLEEAGVIGIVECTLGQWNFISKRHGIYYEGHMFPLFVKEQLDQWPEKNLRRRIWMTVAQAREACQHWWMKEALDILVKRLMSPQQWKDISIS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0653 169 CDD Nudix_Hydrolase_9 22 147 - -
Lal23g0653 169 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 159 - -
Lal23g0653 169 Pfam NUDIX domain 45 149 IPR000086 -
Lal23g0653 169 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Lal23g0653 169 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 159 - -
Lal23g0653 169 SUPERFAMILY Nudix 14 156 IPR015797 -
Lal23g0653 169 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Lal23g0653 169 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0653 Lal-Chr23 9234603 9236969 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0653 23 9234603 9236969 Lal23g0653 23 9234603 9236969 ECH
Lal16g0985 16 6559304 6561274 Lal23g0653 23 9234603 9236969 LSH