Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0977 ATGAGGCTATGGAAAAGAGCAACTGGAGATCTTAAGGACAGGTACAGGATTCTGGTTGCGAGACTGGCGCCACATGGCCCGTGTCGCAACCCGAATCTCGAGTCAGTGATCATCAAGGCCACAAGTCATGATGATCACTGCATGGATTACAAGAACGTTCAAAAAGTTTTTAGATGGCTACGTACTTCGCCATTGTACTTTAAGCCTATTTTGTACAATCTTTCAATGAGAATGGAAAAGACTAATAGTTGGGTTGTAGCACTCAAAGGGTTAATGCTAACTCATGGTCTTTTCTGTTTTGATCTACCAGCTGTGCACAGAATGGGAAGGTTGCCATTCGATTTTTCGCGCTTCACCGATGGACATATGAGTCCTGAAAAAGGATGGGGTTTCAACGCTTTCGTTCGCGCATATTTCGCGTATTTGGATCATAAGTCTATGTTCGTGTTCTCGAAGGCGAAGAGATTGAGCAAAAATGGGAAGGAGAAGGAAACAGAGGAGATATTGATGGAAGAGCTACAGAATTTGGAGAAGTTGCAAGGTTTGATTGACATGGTTCTACAAGTGAAGCCATGGCATCAGAACAAAAAAATGGTGCTAATTCTTGAAGCAATGGATTGTATCATGGATGAGGTTTTTGAATTGTGTGATACATTTTGTGCAGAAATTGATAGAGTGTTGTTGAAGATTTATGATATAGGTGGAAAAGTTGAAGCAGATATTGGACTCAGTATTGTACAGAAAGCTGAAATTCAAGGTGATAAGCTCTCTTTGTATTTTGATTTTTGTAGAGATAATGGTGTCCTTAATGCAATTGAGTGTCCTAAAATATTGAGGGTACCTGAAAAGGACATTAATGAGTTAAGGAGAATAATCAATGGAGTCAATGAGAAGAAAACCTTAGAGGGTACTAATAATGGTGTTGTGGCAAATGAGGACAAGGGTGTTTCTGAGAACAAGGAATCAGAGAATGATTTGAAGACTGTGATCAGTGACCAATGGGAAATATTTGATGATATAATTGTTGATGTTAATGAAAATCCATCCAATGGTGCAAGTTTTGCTATTACCACAACTAACCCTTTTCATGAACCTTATAGCTTGGTTCCTTGTATTGTTCTTCCTGATCTAATTAGTTTATAG 1143 0.3893 MRLWKRATGDLKDRYRILVARLAPHGPCRNPNLESVIIKATSHDDHCMDYKNVQKVFRWLRTSPLYFKPILYNLSMRMEKTNSWVVALKGLMLTHGLFCFDLPAVHRMGRLPFDFSRFTDGHMSPEKGWGFNAFVRAYFAYLDHKSMFVFSKAKRLSKNGKEKETEEILMEELQNLEKLQGLIDMVLQVKPWHQNKKMVLILEAMDCIMDEVFELCDTFCAEIDRVLLKIYDIGGKVEADIGLSIVQKAEIQGDKLSLYFDFCRDNGVLNAIECPKILRVPEKDINELRRIINGVNEKKTLEGTNNGVVANEDKGVSENKESENDLKTVISDQWEIFDDIIVDVNENPSNGASFAITTTNPFHEPYSLVPCIVLPDLISL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0977 380 CDD ANTH_N_AP180_plant 33 148 - -
Lal22g0977 380 Pfam ANTH domain 33 290 IPR011417 GO:0005543
Lal22g0977 380 SUPERFAMILY GAT-like domain 172 294 - -
Lal22g0977 380 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Lal22g0977 380 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lal22g0977 380 Gene3D ANTH domain 156 313 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal22g0977 380 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 346 IPR045192 GO:0048268|GO:0072583
Lal22g0977 380 Coils Coil 159 179 - -
Lal22g0977 380 Gene3D - 5 151 IPR008942 -
Lal22g0977 380 PANTHER OS08G0467300 PROTEIN 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0977 Lal-Chr22 8182123 8183265 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0977 22 8182123 8183265 Lal22g0977 22 8182123 8183265 ECH
Lal22g0977 22 8182123 8183265 Lal18g0515 18 4273827 4274960 LSH