Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0969 ATGTCGACCCTAATGGACCATCTTGATGAAAGAGTTGAAGCGATTGCCCACTCTAATCCTACATCAAATTGGAGTATTCATGTTTCAGATATAAGAACAGTTAAGGTTAGCAACATATCACTAGTTACTCCCAAAAAGGATGTTGGAGAATTCTTTTCATTCTCAGGTGATATTCAATATATTGAGATGCACAGGGAAACTGATCGCACACAGATTGCTTATGTTACCTTCAAGGATTCACAGGGAGCGGAAACAGCAGTTCTCTTGACGGGTTCCAAGATAGGTGATCTATATGTCACCATCGCGCTGGAGGAAAACTACCAGCTGCCTCCTGAAGCTCTTCCAAGAAGTCCGACAAACCAAACTGCTGCTGCAGTTCAGAAGGCTGAAGATGTAATGAGTACCATGCTTGCGAAGGGTTTCATTTTAGGAAAGGATGCAGTCAACAAGGCAAAAACCTTCGATGAACGCCATCACTTGATCTCAAATGCTTCTTCAACAGTTGCTTCCATTGATCGAAAAATTGGTTTAAGTGATAAACTAAGCATTGGAACAGCTATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAAGTTTCTGGTTTCCGAAAAGACAAAGTCTGCTATTGCTATTGCCGAGCAAAAGGCAAGTATTGCTGGATCTGCTATCATGAGCAACCCTTACGTATTAACCGGAGCTTCATGGATGTCAAGTGCCTTTAGTGCTATAGCAAAGGCAGCCGGAGATGTCAGCATGAAGACCAAGGAGAAGGTTGAACAAGCCGAGTTGGAAAAGAAAGAGATCATTTACAACGAAAGGAAAGGGACCGTTGATGATTATGCACGAATACACTTCGAGTCTTTGGATGTTGGCCCTGCAGTAGTTCCTGTCAACTCAGGTGATGATAAGAAGCTGGAAATCATATAA 927 0.4229 MSTLMDHLDERVEAIAHSNPTSNWSIHVSDIRTVKVSNISLVTPKKDVGEFFSFSGDIQYIEMHRETDRTQIAYVTFKDSQGAETAVLLTGSKIGDLYVTIALEENYQLPPEALPRSPTNQTAAAVQKAEDVMSTMLAKGFILGKDAVNKAKTFDERHHLISNASSTVASIDRKIGLSDKLSIGTAIVNEKVREMDEKFLVSEKTKSAIAIAEQKASIAGSAIMSNPYVLTGASWMSSAFSAIAKAAGDVSMKTKEKVEQAELEKKEIIYNERKGTVDDYARIHFESLDVGPAVVPVNSGDDKKLEII 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0969 308 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 12 306 - -
Lal22g0969 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 96 IPR000504 GO:0003723
Lal22g0969 308 Gene3D - 28 102 IPR012677 -
Lal22g0969 308 SMART rrm1_1 33 102 IPR000504 GO:0003723
Lal22g0969 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Lal22g0969 308 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 12 306 - -
Lal22g0969 308 SUPERFAMILY RNA-binding domain, RBD 16 104 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal22g0969 Lal-Chr22 8075572 8079451 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0969 22 8075572 8079451 Lal22g0969 22 8075572 8079451 ECH