Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0387 ATGGAATCAGTGAAGCCTTTGGCAGTGACTCCCGGGAAGAAGTTTGCTCGCGGTTTCGCCAAGTTTATTCATCTTAGTGCATTGATTGGAACTGCACAAGTTGATGGTTTGAAGAATGCTAATGAAAATCTCAAGGAAGAAGGAAACATTGACAAAGCTACAATAAATTGGACTCTCAACTCAAAAGATGATGAGCTTAAGGAAAAGATAGACACAGAAGCTCTCCTTGCAAAGATGTTTGCAAGTACTTCTACTGTGAAAGCTGCATATGCTCAGCTACAATTTGCTCAGTCTCCTTATGACCCTGATGAAGTACAAGCCGCCGATCATGTCGTGGTTTCTGAGTTGAAGCACTTGTCTGAGCTAAAGCAATGTTACTTGAAGAAACAGTTTGATCCTTTACCGGAGACAGCGATTCTTGCAGCCGAATCAAAGGAGCTGCGAAGTGTTATAAAGACCTATGAGATCATGGGGAAGAAGCTTGAGTCACAGGTCCGGCTCAAGGAATCGGAAGTTATGTTTCTTAGAGAGAAGTTAGAGGAAGCTATTAGGCAGAACAAGTCGATTGAGAAAAAATTGAATCAAAGTGGACAGTTATCTGTGCTTGATAATCTTCATATATCAGGGTTAAGTCATAGCCATTTTAGTATCGCTCTTCGTCATGCGGTTAGGTCGATCCGAAGTTTTGTGAGGTTAATTGTGGATGAGATGAGGTCTTCCAGTTGGGATGTTGATTCTGCAATCAATGCTATTGAACAGGGTGTTGTTTACTGGATAGAAGATCACAAGTGTTATGCAATTGAGTCCTTTGTTTGCAAGGAAATGTTTGATTCTTTCCATTTCCCTAATTTCTCTCTTCCGAATGAGTCTCTTCCAGAGAGAAACAAGCAACCGCAATGGTTCTTTGGGAGGTTCAATGAGCTGAGATCCATGAAAGCGAAGGAGTTTCTCGCCGAGAACCCGAGGTCATCATTTGCGAAATTCTGCAGGGTTAAGTATTTGAAACTTGTTCATCCCAAGATGGAGTCATCATTCTTTGGTAACCTGAACCAAAGGAGCCTTTTGAAAGCTGGAGAGTTTCCAAACACCGCTTTCTTCGCATCGTTTACCGAGATGGCCAAGAGGGTATGGCTCCTACATTGCTTAGCCTTCTCTTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGAGAAGGGGTGTAGATTCTCTGATGTGTACCTTGAAAGTGTGAATGATGAAATGTTCCTCCAAACAGTAGAATCAGAACCACATGTTGCTTTCACAGTGGTTCCAGGGTTTAGGATTGGTAAAACTGTTATACAGTGCCAAGTTTACCTCTCAGCACCAAACCAAGGTAAAAAAAAGTCCACTTCCTCAAAGCTAAGGTAA 1386 0.4206 MESVKPLAVTPGKKFARGFAKFIHLSALIGTAQVDGLKNANENLKEEGNIDKATINWTLNSKDDELKEKIDTEALLAKMFASTSTVKAAYAQLQFAQSPYDPDEVQAADHVVVSELKHLSELKQCYLKKQFDPLPETAILAAESKELRSVIKTYEIMGKKLESQVRLKESEVMFLREKLEEAIRQNKSIEKKLNQSGQLSVLDNLHISGLSHSHFSIALRHAVRSIRSFVRLIVDEMRSSSWDVDSAINAIEQGVVYWIEDHKCYAIESFVCKEMFDSFHFPNFSLPNESLPERNKQPQWFFGRFNELRSMKAKEFLAENPRSSFAKFCRVKYLKLVHPKMESSFFGNLNQRSLLKAGEFPNTAFFASFTEMAKRVWLLHCLAFSFEPQASIFQVEKGCRFSDVYLESVNDEMFLQTVESEPHVAFTVVPGFRIGKTVIQCQVYLSAPNQGKKKSTSSKLR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0387 461 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 445 IPR040225 GO:0009639|GO:0009959
Lal20g0387 461 Coils Coil 165 199 - -
Lal20g0387 461 PANTHER OS01G0203800 PROTEIN 1 445 - -
Lal20g0387 461 Pfam Plant protein of unknown function (DUF641) 71 192 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0387 Lal-Chr20 3072468 3077585 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0638 2 3809043 3814125 Lal20g0387 20 3072468 3077585 ECH
Lal20g0387 20 3072468 3077585 Lal20g0387 20 3072468 3077585 ECH
Lal20g0387 20 3072468 3077585 Lal11g1470 11 17974814 17984632 LSH
Lal20g0387 20 3072468 3077585 Lal1g1614 1 18558458 18559849 LSH