Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal20g0374 | ATGGCAAGCAATAGGAACATGGAAAAGATGGCATCTATTGATGCACAACTTAGACAATTGGCTCCAGCCAAAGTGAGTGAGGATGATAAATTGATTGAGTATGATGCTCTACTTCTGGATCGGTTCCTTGATATTCTCCAGGATTTGCATGGGGAGGATCTGAAGGACACAGTTCAAGAAGTATATGAGCTTTCTTCTCAGTATGAAGGAAAGCATGACCCTAAGAAACTGGAAGAAATTGGAAATGTGATAACTAGTTTGGATGCTGGAGACTCAATTGTTGTGGCCAAGTCATTTTCCCATATGCTAAACTTGGCCAACTTAGCCGAAGAGGTTCAGATTTCTCACCGCAGAAGGAACAAGTTGAAGAAAGGAAATTTTGCAGATGAGACTAATGCAACTACAGAATCAGACATCGAAGAAACTCTCAAGAGACTTGTGTTTGATTTGAAGAAATCTCCTCATGAAGTTTTTGATGCACTGAAAAGCCAAACTGTTGATCTTGTTCTTACTGCTCATCCTACTCAATCGATTCGTAGATCTTTGCTTCAAAAACATGCTAGGATACGAGATTGTTTATCTCATTTGTATGCCAAAGATATCACTCCTGATGATAAGAAAGAGCTTGATGAGGCTCTACAGAGGGAGATTCAAGCTGCTTTTCGTACCGATGAAATCAAGAGGACTCCTCCAACACCACAAGATGAGATGAGAGCTGGAATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTTCCTAAATTTCTACGTCGTGTTGACACCGCTTTGAAGAATATTGGGATTAATGAGTGTATTCCTCATAATGCTCCCGTTATTCAATTTTCTTCTTGGATGGGCGGTGATCGTGATGGTAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTGTTGGCTAGAATGATGGCTGCTAATATGTATTATTCCCAGATAGAAGACCTCATGTTTGAACTGTCTATGTGGCGTTGCAGCGATGAGCTACGCAATCGTGCAGATGAACTTCACAGGTCTTCCAATAAAGATGAAGTTGCAAAACACTATATAGAGTTTTGGAAAAAGGTTCCGGCAAATGAACCATATCGTGTAGTACTGGGTGAAGTAAGGGACAGACTCTATCAGACTCGTGAACGTTCTCGCCATTTGCTAGCTCATGGGTACTCTGACATTCCAGAGGAAGCAACTTTCACCAATGTTGAAGAGTTCCTGGAACCTCTTGAAGTTTGTTACAGATCGCTTTGTGCTTGTGGTGATCGTCCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAATATCGACATTTGGACTGTCGCTTGTGAGGCTTGATATCAGGCAAGAGTCAGACCGTCACACGGATGTGATGGACGCTATTACCAAACATCTGGAAATAGGCTCCTACCTGGAATGGTCCGAAGAAAAAAGACAAGAATGGCTTTTGTCCGAATTGAGCGGTAAAAGGCCACTTTTTGGACCTGACCTTCCCAAAACAGAAGAAATTAGAGATGTTCTGGACACATTTCATGTCCTAGCAGAACTGCCACCAGACAACTTTGGAGCATATATCATATCAATGGCAACTGCACCATCTGATGTGCTAGCAGTTGAACTTCTGCAGCGCGAATGCCATATCAAGCATCCATTAAGAGTTGTCCCGTTGTTTGAGAAGCTTGCAGATCTTGAGGCTGCTCCTGCTGCTCTGGCGAGGTTGTTCTCAATAGATTGGTACATAAATAGGATTGACGGGAAGCAAGAAGTCATGATCGGGTATTCTGATTCAGGAAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGTTATACAAGGCTCAAGAGGAACTTATAAAAGTAGCTAAGAAATTTGGCGTTAAGCTAACCATGTTCCATGGTCGCGGTGGGACTGTTGGAAGAGGTGGTGGTCCAACTCACCTTGCTATCCTGTCTCAACCTCCAGACACAATCCATGGTTCACTTCGTGTAACGGTCCAAGGTGAAGTTATTGAGCAATCATTTGGAGAGCAGCACTTGTGCTTTAGAACACTTCAACGTTATACTGCTGCCACTTTAGAGCATGGAATGAATCCTCCGATTTCTCCAAAACCAGAATGGCGAGCGTTGATGGACCAGATGGCTGTCATTTCTACTGAGGAATACCGTTCTATTGTTTTCAAGGAACCACGCTTTGTCGAGTATTTCCGCCTGGCTACACCTGAGTTGGAGTATGGCCGAATGAACATCGGAAGTCGACCAGCAAAGCGAAGGCCTACTGGAGGCATTGAAACACTCCGCGCAATACCTTGGATCTTTGCATGGACACAAACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCAGCATTTAAACAGGTTATTGAGAAGGATGTTAGGAATCTTCACATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACCATTGATTTAGTGGAAATGGTTTTTGCCAAGGGAGACCCAGGAATAGCTGCTCTGAATGATAGACTACTTGTTTCAAAGGATCTATGGCCATTTGGGGAGCAGTTGAGGAAAAAATATGAAGAAACTAAGAATCTCCTCCTTAAGGTGGCTGCACACAAGGATCTTCTTGAAGGAGACCCCTACTTGAAGCAAAGACTTAGGCTGCGTCATTCTTACATTACTACCCTAAATGTTTTCCAAGCTTACACATTGAAACGCATTCGTGATCCGAACTTTAACGTGCGGCCGCGCCACCATATCTCGAAAGAGTCTTTGGAGAAAAGTACATCAGCTACTGAACTTGTATCACTGAATCCAACAAGTGAATATGCCCCTGGTTTGGAAGACTCTCTCATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA | 2907 | 0.4345 | MASNRNMEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKDTVQEVYELSSQYEGKHDPKKLEEIGNVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISHRRRNKLKKGNFADETNATTESDIEETLKRLVFDLKKSPHEVFDALKSQTVDLVLTAHPTQSIRRSLLQKHARIRDCLSHLYAKDITPDDKKELDEALQREIQAAFRTDEIKRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINECIPHNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYYSQIEDLMFELSMWRCSDELRNRADELHRSSNKDEVAKHYIEFWKKVPANEPYRVVLGEVRDRLYQTRERSRHLLAHGYSDIPEEATFTNVEEFLEPLEVCYRSLCACGDRPIADGSLLDFLRQISTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYLEWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIRDVLDTFHVLAELPPDNFGAYIISMATAPSDVLAVELLQRECHIKHPLRVVPLFEKLADLEAAPAALARLFSIDWYINRIDGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMNPPISPKPEWRALMDQMAVISTEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPTGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKQVIEKDVRNLHMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSKDLWPFGEQLRKKYEETKNLLLKVAAHKDLLEGDPYLKQRLRLRHSYITTLNVFQAYTLKRIRDPNFNVRPRHHISKESLEKSTSATELVSLNPTSEYAPGLEDSLILTMKGIAAGMQNTG | 968 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal20g0374 | 968 | Hamap | Phosphoenolpyruvate carboxylase [ppc]. | 24 | 968 | IPR022805 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 2. | 594 | 606 | IPR033129 | - | |
Lal20g0374 | 968 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 1. | 169 | 180 | IPR018129 | - | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 168 | 181 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 221 | 237 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 281 | 296 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 443 | 463 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 592 | 612 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 634 | 663 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PRINTS | Phosphoenolpyruvate carboxylase signature | 766 | 792 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 3 | 968 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 3 | 968 | - | - | |
Lal20g0374 | 968 | SUPERFAMILY | Phosphoenolpyruvate/pyruvate domain | 34 | 968 | IPR015813 | GO:0003824 | |
Lal20g0374 | 968 | Pfam | Phosphoenolpyruvate carboxylase | 36 | 968 | IPR021135 | GO:0006099|GO:0008964|GO:0015977 | |
Lal20g0374 | 968 | Gene3D | Phosphoenolpyruvate/pyruvate domain | 309 | 446 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal20g0374 | Lal-Chr20 | 2993657 | 2999975 | Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal20g0374 | 20 | 2993657 | 2999975 | Lal20g0374 | 20 | 2993657 | 2999975 | ECH | |
Lal20g0374 | 20 | 2993657 | 2999975 | Lal11g1464 | 11 | 17927097 | 17933073 | LSH | |
Lal20g0374 | 20 | 2993657 | 2999975 | Lal1g0602 | 1 | 3846060 | 3851976 | PCT | |
Lal20g0374 | 20 | 2993657 | 2999975 | Lal2g0632 | 2 | 3757259 | 3763295 | PCT | |
Lal20g0374 | 20 | 2993657 | 2999975 | Lal9g0549 | 9 | 3715922 | 3721726 | PCT |