Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0528 ATGGCGGACGCACTCTTGGTGGTTCCGGCAGCCGTGCTCCGCAACCTCGCCGATAAGCTCTACGAAAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGTATAGTGAAACAACTTGCTGCTAATGGTGAACATGATAAGATAACTTCTGTTATCAATTTGTTAACTTCTGAATTCACTTATTCGCCGCAAGCAAATCATCGTAAGGGAGGGTTGATAGGTTTAGCTGCTGCTACTGTTGGATTGACTACTGATGCTGCTCAGCATCTTGAGGAAATTGTGCCCCCCGTGTTAAATTCTTTCTCTGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAAGTTGTGAGAGGAGATTTTATTATATTCTTCAATCAGATATTTGATGTTTTATGCAAGCTATCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCTTAGATCGACTCGTGAAGGATATTGTGACTGAAAGTGACCAGTTCAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGCATGAATGTATTGAATCCGTATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTCGGTTTTCTTCCTGATTTTCTTGATGGTCTGTTTAATATGCTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAATTCCCCAGTAAGGCTTCTGCTAATCTGTGCTGTGCATCATTTTCAACCACTTTTTTTTACACAAAAGCAACATGTTTTGTTCATTTGTCATTTTCTGACTCGAGCAGTGCTACTCTTGAAGTCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCTGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTAGGTGGAGACCAGCTGGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTTGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCTACTGAAGCATTTGATGTAGGAGCGATCCTCTCGATTGCTAGGAGGCAACTATCTAGTGAATGGGAAGCTACGCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTGAACAGGCATCGTACTGAGGTTTTGGCATTTCTGAACGACATATTTGACACCTTACTCAAAGCACTTTCAGATCCATCTGATGAGGTTGTACTTGTAGTTCTTGATGTACATGCATGCATCGCAAAAGATCCTCAGCATTTCCGTCAGCTTGTTGTTTTCCTAGTGCACAATTTCCGGCTTCATAATTCTCTTTTGGAGAAGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGAATGCTGAGAGGGTCTATCGTGAACTTTCTACAATATTAGAAGGGGAATCTGATTCGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGATTCGATATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATATTGCTTTGTATGCTTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTTTGCTTTATAGCTCAGACCTATCAGCATGCAAGTGTCGTGATTCAATCTCTGGTAGAGGAGGATATTAATCCCAAATTTTTGGTCCAGCTGGATAAATTGATTCACTTGCTGGAAACTCCTATCTTTGCATATCTTAGATTGCAGCTTCTTGAACCTGAAAGATACATATGGTTATTCAAAGCATTGTACGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAAATATTAAAAACTCGTTTAAAAGCTGTTCCATCGTATTCTTTCAATGGCATGCAATCGAAGAGAATGCCTTCAGGGGATTCCTATCAATTTCTTCATCACATGTCTAATGGATCTCAAATTATTGAGGATGGTGTCTTAGCTGAAGATGGTGGGAGCTCACATAATGGAATAAATTTCGATGCTAGGCTACAACAGTTTCAGAAAATGCAGCATCTGCATCGGATGCACTTTAAAGTGCAGACGAAGTCTCTCAATAATTCTACCCCATCACCAAAGGAGGCGAAAAGAGAGGAAGAACCATGTAGAACACAGTCTATTGACCTTAATGTTCCTCCTCATAGATCATCAAAGAGAGGTCCAGGGCAGCTACAATTATAG 2289 0.4059 MADALLVVPAAVLRNLADKLYEKRKNAALEVEGIVKQLAANGEHDKITSVINLLTSEFTYSPQANHRKGGLIGLAAATVGLTTDAAQHLEEIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDVLCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPVRLLLICAVHHFQPLFFTQKQHVLFICHFLTRAVLLLKSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVACETNEELRAIKADPTEAFDVGAILSIARRQLSSEWEATRIEALHWISTLLNRHRTEVLAFLNDIFDTLLKALSDPSDEVVLVVLDVHACIAKDPQHFRQLVVFLVHNFRLHNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDSDFASIMVQALNLILLTSSELSEIRYLLKQSLVNPAGKDLYIALYASWCHSPMAIISLCFIAQTYQHASVVIQSLVEEDINPKFLVQLDKLIHLLETPIFAYLRLQLLEPERYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGMQSKRMPSGDSYQFLHHMSNGSQIIEDGVLAEDGGSSHNGINFDARLQQFQKMQHLHRMHFKVQTKSLNNSTPSPKEAKREEEPCRTQSIDLNVPPHRSSKRGPGQLQL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0528 762 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lal18g0528 762 SUPERFAMILY ARM repeat 11 631 IPR016024 -
Lal18g0528 762 Gene3D - 125 268 IPR011989 -
Lal18g0528 762 Gene3D - 8 124 IPR011989 -
Lal18g0528 762 PANTHER TAX1 BINDING PROTEIN-RELATED 4 249 IPR026825 GO:0006661|GO:0070772
Lal18g0528 762 PANTHER TAX1 BINDING PROTEIN-RELATED 287 732 IPR026825 GO:0006661|GO:0070772
Lal18g0528 762 MobiDBLite consensus disorder prediction 715 762 - -
Lal18g0528 762 PANTHER PROTEIN VAC14 HOMOLOG 4 249 - -
Lal18g0528 762 PANTHER PROTEIN VAC14 HOMOLOG 287 732 - -
Lal18g0528 762 Gene3D - 269 454 IPR011989 -
Lal18g0528 762 Pfam Vacuolar protein 14 C-terminal Fig4p binding 467 646 IPR021841 -
Lal18g0528 762 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0528 Lal-Chr18 4377536 4390050 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0528 18 4377536 4390050 Lal18g0528 18 4377536 4390050 ECH
Lal6g0724 6 4841556 4842872 Lal18g0528 18 4377536 4390050 LSH