Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0526 ATGGAAACCGCAATGAGAATGATGTCGCTAGAGATCGGAGCCCTGGGAATTAATCTCCTTCGCAATACCAGAAAGTGTTGGTCTAGTAGTATAAGGCACCGTCAGATCCAACTAAAAGGTTTACCAAACAAAGTGAATCATTCAGTATTGGGATTTCATTTATTTGGTGGTGAGTGGGCTTTTACTGGGTTGCCTGTTATCTTTCTGGGATTTGATGTTTTCTTTGCGATCTTGTGTATTCTTTTGGCATGCTTGATTGGCATTGCCATCTGTTGTTCTTTTTCCTGCATCAATGCTTTTCTCTATGCTGTTGCAGTACAGAAAAGTGCATCAGATGCAGATCTTATTATACTTCCAAGATACCGATTTCGAATATTAAGCAATGACGAAAAGGCTACTGGGGGAGCTGGAGCAATGTTTCCCGTAGAAAATGACAGCAGTTACTTAGCGAAGGAAAGAATACTTTTACCAGAGGATACGCCTACTGGTTTTCAACATTTGGATGTGAGAATAGTAGGTTTTCGGCACCGGTCCAGATCGGCGATGGCGGAGTTTATCGGTGACGGGGGATGTCTGTCGACGGAGGAGGTGGTGGTAACGCCGGCATCGTTCATGGCGTCGAGTTCGTGCAAGGAAGGTAGAGGCTCTTCATCGCGGAGGCGTGGCTCGATGAGGCCGCCGAGCATGGACGCCGATGAGTTCATGAACCTGTTGCACGGTTCGGATCCGGTGAAGGTTGAGCTCAATCGGCTCGAGAATGAAGTTCGAGATAAGGATAGAGAATTATCAGAAGCGCAAGCCGAAATCAAAGCCTTGAGACTCTCTGAAAGACTTAGAGAAAAAGCAGTTGAAGAGCTTACTGAAATACTGTCAAAGGTTGAAGGGAAGCTAAAATTAACGGAGTCTCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATAAACGATGAAAAGAAGGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGAAGGGTCCATGCTGCTCAGAAGGACGATGACATGCCTCCGATAGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTCAAGCTTGCTCGGCAAGAGATGGCTAAACTTCAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTACTTGAAGCTGAGAGAACTGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTTCAAAACAAAAATCAAGAGCTAAGTAAACAGATTGAGATTTGCCAGGAAGAGAATAAAATTTTGGACAAAATGCATAGACAGAAGGTGGCAGAGGTTGAAAAGCTCACTCAAACTGTTAGGGAGCTAGAAGAGGCCGTCCTTGCAGGTGGCGCAGCTGCAAATGCTGTGAGAGATTATCAGCGGAGAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTGACAGGGAGTTGGCTCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTTGTGGTCGCAAATGAATGGAAAGATGCTAATGATAAAGTGATGCCTGTCAAACAATGGCTTGAAGAACGTAGATTCTTGCAGGGAGAGATGCAGCAGCTCCGTGACAAGCTTGCTATTGTTGAGCGCACTGCAAAATCTGAGGCACAGTTGAAAGAAAAATATATTTTACGACTTAAAGTGCTAGAGGACAGTTTGAGAGGAAATTCGAACAGTAATAATCACGGAACCTCAGAGGGAAGAAGTATAAGCAATGGCTCTTCTCGTCGCCAATCCCTAGGGGGAGCTGATAACTTCTCAAAACTAACATCTAATGGGTTTTTGCCAAAGAGAACACCATCCTCTCAACCGAGGTCATCTCTATCCTCTAGCACTATTTTGAAACATGCTAAAGGAACATCCAAATCTTTTGATGGTGGCACAAGGTCACTTGAAAGGAGTAAAATTCTGCTGAATGGAACACCTCCTAGTTACTCATTCAACCAATCTATTGAAGAAACTAAAGACAGAGAGGCAAATGATGATTGGAAAGGAAGTTCCGATGATAAGCCAAGTGACTCCCCAACGGTGGGTATAGGGGATAGCGTCCCAGGTGTTTTGTATGACCTGCTGCAGAAAGAGGTCATGGCCTTGAGGAAAGCTGGTCATGAGAAAGACCAAAGCCTAAAAGATAAAGACGATGCAATCGAAATGTTAGCAAAGAAGGTAGATACATTGACCAAAGCCATGGAAGTTGAAGCAAAGAAGATGAGAAGGGAAGTAGCTGCCATGGAGAAGGAGGTAGCTGCTATCCGTTTGGAGAAAGAACAAGATAACAGAGCAAAGCGGTTCAGCAATGTAAAGGCCCCTGTAAACAGTGCTCAGCATCAGCTGATTTCAGGAAGCATCTCACAGCTGAATTCTGTCTTTATATTATTATTATTGAAATGTAACACGTGGAGGGTTGACTCGCAGCACCCAATGATGACAATAAGTCTATTACAGTGGGACTCGAGTAAACTTGCAAAGGCATCCTTCTTCTGCCCTTCTCTGTTTTTTCCTCCTTTTGTCAAATTGATTGTAAGCTTGTAA 2553 0.4383 METAMRMMSLEIGALGINLLRNTRKCWSSSIRHRQIQLKGLPNKVNHSVLGFHLFGGEWAFTGLPVIFLGFDVFFAILCILLACLIGIAICCSFSCINAFLYAVAVQKSASDADLIILPRYRFRILSNDEKATGGAGAMFPVENDSSYLAKERILLPEDTPTGFQHLDVRIVGFRHRSRSAMAEFIGDGGCLSTEEVVVTPASFMASSSCKEGRGSSSRRRGSMRPPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLREKAVEELTEILSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEMAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELSKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRRVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERTAKSEAQLKEKYILRLKVLEDSLRGNSNSNNHGTSEGRSISNGSSRRQSLGGADNFSKLTSNGFLPKRTPSSQPRSSLSSSTILKHAKGTSKSFDGGTRSLERSKILLNGTPPSYSFNQSIEETKDREANDDWKGSSDDKPSDSPTVGIGDSVPGVLYDLLQKEVMALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAIRLEKEQDNRAKRFSNVKAPVNSAQHQLISGSISQLNSVFILLLLKCNTWRVDSQHPMMTISLLQWDSSKLAKASFFCPSLFFPPFVKLIVSL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0526 850 Coils Coil 462 489 - -
Lal18g0526 850 MobiDBLite consensus disorder prediction 658 676 - -
Lal18g0526 850 Pfam Microtubule-associated protein 70 232 782 IPR009768 GO:0007010|GO:0008017
Lal18g0526 850 Coils Coil 511 545 - -
Lal18g0526 850 Coils Coil 734 768 - -
Lal18g0526 850 Coils Coil 403 451 - -
Lal18g0526 850 Coils Coil 297 317 - -
Lal18g0526 850 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 182 789 IPR009768 GO:0007010|GO:0008017
Lal18g0526 850 MobiDBLite consensus disorder prediction 641 657 - -
Lal18g0526 850 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 182 789 - -
Lal18g0526 850 Coils Coil 351 378 - -
Lal18g0526 850 MobiDBLite consensus disorder prediction 560 634 - -
Lal18g0526 850 MobiDBLite consensus disorder prediction 560 688 - -
Lal18g0526 850 Coils Coil 248 275 - -
Lal18g0526 850 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0526 Lal-Chr18 4350260 4361754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0526 64 159 C3H Transcription Factor Family AT1G68070 61.458 1.72e-33 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0526 18 4350260 4361754 Lal18g0526 18 4350260 4361754 ECH