Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0524 ATGGATGAAAGAAGAGATTTTGCACTGACCCAGATGAGAAATTCTGTTCACAAGCTTGGCTCTTCTGCAGAGGGGTATAAGGACCCTACACTGCTGAGGTTTTTGGTTGCTCAATCAATGGATCCGGATAAAGCAGCAAAGATGTTTTTCCAGTGGCAGAAATGGAGGGCTTCCTTGGTGCCTAATGGGTTCATTTCAGAATCTGAAGTTGTAGATGAATTGGAAACTAGAAAGGTTTTTTTGCAGGGCTTGTCTCAGGACAAATACCCCGTGATGCTTATCCGAACAAATAAGCATTTCCCTGCTGAGGATCAGAATCAATTCAAGAAATTTGTTGTATATCTACTCGACAAGGCAATAGCCAGTGCTTTCAAAGGAAGGGAGATAGGAAATGAAAAGTTGATTGGGGTTATTGACCTGCAGAGTATTTCATATAGAAACATCGATGCACGTGGGTTAATCACTGGATTCCAATTTTTACAGGCTTACTACCCTGATCGTTTAGCAAAGTGCTATATTTTACACATGCCATGGTTTTTTGTGAGTGTTTGGAAAGTAATTTCTCGCTTTCTAGAGAAGGCAACACTAGAAAAGATTGTAATTGTAAGCAATGAGGATGAGAGAAAGAAGTTTATAAGAGAGGTTGGTGAAGAGGTTCTCCCAGAAGAGTATGGTGGTAGAGCAAAGCTTGTAGCTATCCAAGATGTCCAATTGACACCAATGGAGAATGGAACAACAAATTGA 744 0.4046 MDERRDFALTQMRNSVHKLGSSAEGYKDPTLLRFLVAQSMDPDKAAKMFFQWQKWRASLVPNGFISESEVVDELETRKVFLQGLSQDKYPVMLIRTNKHFPAEDQNQFKKFVVYLLDKAIASAFKGREIGNEKLIGVIDLQSISYRNIDARGLITGFQFLQAYYPDRLAKCYILHMPWFFVSVWKVISRFLEKATLEKIVIVSNEDERKKFIREVGEEVLPEEYGGRAKLVAIQDVQLTPMENGTTN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0524 247 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Lal18g0524 247 Gene3D - 1 242 IPR036865 -
Lal18g0524 247 PANTHER OS03G0850700 PROTEIN 1 239 - -
Lal18g0524 247 SUPERFAMILY CRAL/TRIO N-terminal domain 2 64 IPR036273 -
Lal18g0524 247 CDD SEC14 79 226 IPR001251 -
Lal18g0524 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Lal18g0524 247 SMART sec14_4 73 229 IPR001251 -
Lal18g0524 247 Pfam CRAL/TRIO domain 75 226 IPR001251 -
Lal18g0524 247 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0524 Lal-Chr18 4332271 4339454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0524 24 202 Acyl Lipid Metabolism Gene Families AT1G55840 23.469 1.13e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0524 18 4332271 4339454 Lal18g0524 18 4332271 4339454 ECH
Lal22g0967 22 8058215 8073031 Lal18g0524 18 4332271 4339454 LSH