Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0520 ATGTCAACTTTGACCATACCTCCTGCATTAACAACACCTCGTGATGATGCTCGCACACTCTATAAAGCTTTCAAAGGACTTGGCTGTGATACATCAAATGTTATAAAAATTCTTGCTCATAGGGATTCAGTGCAACGGGACCGGATTCAACAAGAATATGAAACTACTTATTCTGAATCACTTTCCAAACGGTTATCTTCAGAGCTTCATGGAAATCTAAAGAAAGCAGTGTTACTTTGGCTACATGATCCTGCAACCAGGGATGCCACAATATTAAGGCAAGCCTTAAGTGCACAATCTGGACCTATAGTTGATTATCAAGCTATAACAGAAGTTGTATGTTCTCGTACCCCATCACAACTAAGGAGATTGAAAGAAGTTTATCTGTCACTATATCATTCCTATCTTGAACGTGACATTGAAAACCAGACCAATGGAGATCACAAAAAGTTGTTGCTCGCATACATAAGCGTACCACGCTACGAGGGCCCAGAACTCGATCAATTAATAGTACAACAAGATGCACAAGAACTATACAATGCAGGGGAGAAGAAGAGAGGAACTGATGAGAAAATGTTCATAAAGATCTTTAGTGAAAGAAGCAGTGCACATTTGGCTGCAGTAGCTTCTGCTTACAAAGCTCATGGTAACACATTGGAAAAGGCAATAAAGAAGGAAACATCTGGCTTATTCTTGAGTGGCCTCTTGACCATACTAAGGTGTGCTACTATCCAAGCATTGTACTTTGCCAAGATTCTACGGAAATCGATGAAGGGTGTGGGAACTGATGATAGTAGACTAATAAGGGTAATTGTGACAAGGACTGAGATTGATATGCAATTCATAAAATCAGCATATTATAGTAAATATGGAAAACCATTAACCCATGCTGTTCGTTCAGACACTTCAGGCCATTACAAAGATTTTCTTCTACATCTTCTAGGTCCTGATTATTAA 957 0.3908 MSTLTIPPALTTPRDDARTLYKAFKGLGCDTSNVIKILAHRDSVQRDRIQQEYETTYSESLSKRLSSELHGNLKKAVLLWLHDPATRDATILRQALSAQSGPIVDYQAITEVVCSRTPSQLRRLKEVYLSLYHSYLERDIENQTNGDHKKLLLAYISVPRYEGPELDQLIVQQDAQELYNAGEKKRGTDEKMFIKIFSERSSAHLAAVASAYKAHGNTLEKAIKKETSGLFLSGLLTILRCATIQALYFAKILRKSMKGVGTDDSRLIRVIVTRTEIDMQFIKSAYYSKYGKPLTHAVRSDTSGHYKDFLLHLLGPDY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0520 318 ProSiteProfiles Annexin repeat profile. 83 157 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Lal18g0520 318 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Lal18g0520 318 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Lal18g0520 318 PRINTS Annexin family signature 257 277 IPR001464 GO:0005509|GO:0005544
Lal18g0520 318 PRINTS Annexin family signature 301 314 IPR001464 GO:0005509|GO:0005544
Lal18g0520 318 Gene3D Annexin 83 157 IPR037104 GO:0005509|GO:0005544
Lal18g0520 318 Pfam Annexin 248 313 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 Pfam Annexin 16 79 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 Pfam Annexin 88 154 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 Pfam Annexin 173 238 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 PANTHER ANNEXIN 8 318 - -
Lal18g0520 318 SUPERFAMILY Annexin 2 317 IPR037104 GO:0005509|GO:0005544
Lal18g0520 318 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 PANTHER ANNEXIN 8 318 - -
Lal18g0520 318 Gene3D Annexin 160 244 IPR037104 GO:0005509|GO:0005544
Lal18g0520 318 SMART annex3 104 155 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 SMART annex3 187 238 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 SMART annex3 261 313 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 ProSitePatterns Annexin repeat signature. 261 313 IPR018252 GO:0005509|GO:0005544
Lal18g0520 318 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Lal18g0520 318 ProSiteProfiles Annexin repeat profile. 244 315 IPR018502 GO:0005509|GO:0005544
Lal18g0520 318 Gene3D Annexin 246 316 IPR037104 GO:0005509|GO:0005544
Lal18g0520 318 ProSiteProfiles Annexin repeat profile. 169 240 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0520 Lal-Chr18 4296119 4299126 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0520 18 4296119 4299126 Lal18g0520 18 4296119 4299126 ECH