Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0515 ATGAGGCTATGGAAAAGGGCTGCAGGAGCTGTTAAGGACAAGTACAGCATTTGGGTTGCGAGGCTCGCGCCACGAGGCCCTTGTCGCAACCCTGATCTCGAAACCGTGATCATCAAGGCAACTAGCCATGATGAACAATGCATGGATTACAAGAATGTTCAAAGAGTTTTTAGATGGCTGCGTACATCACCATTGTATCTTAAACCAATTTTGTATACAATTTCTAAGAGAATGGAAAAAACTCATAGTTGGGTTGTAGCACTCAAGGGGCTAATGCTAATTCATGGAGTTTTCTGTTTTGATCTACCAATTGTGCAAAGGATGGGAAGGTTGCCATTCGATTTTTCGCGCTTCACCGATGGACATATGAGTCCTGAAAAAGGTTGGGGTTTCAACGCTTTTGTTCGCGCATATTTCGCGTATTTGGATCATAAGTCTGTTTTTATTTGCGCCAAGGCGAAGAAATTAAGCAAAAATGGGAAGGAGAGGGGAACAGAGGAGACATTAATGGAAGAGCTAGAAAATTCGGAAAAGTTGCAAGGCCTAATTGATATGCTTATACAAATAAAGCCTTGGAATGAGCACATGAAAGTTGTTTTGATTCTTGAAGCAATGGATTGTATTATGGATGAGGTTATTGAATTGTATGATACATTTTGTACTGAAATTGATAGATTATTGGTGAAGATATATGATGTAGGTGGAAAAGTTGAAGCAAGTATTGGACTCAGTATTGTAGAGAAAGCTGAATTTCAAGGTGATAAGCTTTCTTTGTATTTTGATTTTTGTAGAGATATTGGTGTCCTTAATGCATCTGAGTGTCCTAAAATTTTGAGGATACCTGAAAAGGACATTCATGAACTAAGGAAAATAATCAATGGGGTCCCTGAGAAGAAAATCTTAGAGGGTACTAAAAATGATGTTAAGGCCAATGTGGACAAGGCTATTATTTCTGAGAACAATTTGAGGACTGTGATCAGTGAAAAATGGGAAGTATTTGATGATGATATAGTTATTGATGTTAAGGAAAATCCTTCAAATGTTGCAAGCTGTGATATTGTCACAACTAACCCTTTTCTGGAATCTTGTAGTTTGGTGCCTTATATTGTTCTTCCTGATCTAATTTGTTTGTAG 1134 0.3792 MRLWKRAAGAVKDKYSIWVARLAPRGPCRNPDLETVIIKATSHDEQCMDYKNVQRVFRWLRTSPLYLKPILYTISKRMEKTHSWVVALKGLMLIHGVFCFDLPIVQRMGRLPFDFSRFTDGHMSPEKGWGFNAFVRAYFAYLDHKSVFICAKAKKLSKNGKERGTEETLMEELENSEKLQGLIDMLIQIKPWNEHMKVVLILEAMDCIMDEVIELYDTFCTEIDRLLVKIYDVGGKVEASIGLSIVEKAEFQGDKLSLYFDFCRDIGVLNASECPKILRIPEKDIHELRKIINGVPEKKILEGTKNDVKANVDKAIISENNLRTVISEKWEVFDDDIVIDVKENPSNVASCDIVTTNPFLESCSLVPYIVLPDLICL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0515 377 CDD ANTH_N_AP180_plant 33 148 - -
Lal18g0515 377 PANTHER OS08G0467300 PROTEIN 1 343 - -
Lal18g0515 377 Gene3D - 4 151 IPR008942 -
Lal18g0515 377 Gene3D ANTH domain 155 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal18g0515 377 SUPERFAMILY GAT-like domain 171 294 - -
Lal18g0515 377 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lal18g0515 377 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Lal18g0515 377 Pfam ANTH domain 32 292 IPR011417 GO:0005543
Lal18g0515 377 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 343 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0515 Lal-Chr18 4273827 4274960 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0515 18 4273827 4274960 Lal18g0515 18 4273827 4274960 ECH
Lal22g0977 22 8182123 8183265 Lal18g0515 18 4273827 4274960 LSH