Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0989 ATGAACACTTTGTGTGTGTATTGTGTAGGCTTCGCAAAGAACTCGGCTGCACAGTGGCTCTTCTCCAACAAAGTCTCTACAGTTCCACATTTGATGTCTTTCAAGGCTTATCGAGATGACAAGGCTAAAAAGATGGTGACAAACATTAGTGCAGATGCATTTGATTCTAGTAAAAAACACTCCGCTGGTGAACCCCTCAAATCTTTCAACCATGATGGACAAGGCGGCTTCCATTTTCCCCCGACTTCGTATCCTGTACAACATGATGTGAATTTTGTGAATCATCCTCATGATGTGAAGATGTTTTCAGTTTCCAATCAGGCAATCACTGGGAACCCATTCCTGAAGAGTCATTTTGCAACTGCTGATCCGAATATGAATGGTGTTAATGTGAAGCAGCCACTATTCGGGGGAATACCTGTTACAGCACCTCATTCAGTTCTTCCAGCGATTGGTTCTATTGCTGCAATGACTGAATCATGTAATGGCGTGATACCATCTGCATCTTCTGCTCAACTTACCATCTTCTATGCGGGTACTGTCAATGTCTTTGATGATATCTCTGCCGGGAAGGTGCAAGCAATCATGTTAATGGCTGGCAATGGCTTTTCTGTTGCTTCTAACACAGAACAGCCAAAAGTTCTGGCACCTGGCTCAAAGTTGACAGCTGATGATTGTGTGCCTATGATTCAAGCTACAAGTGCAGCACCGAGCTCTGGTCTTTCAAGTCCTTTATCCGTTTCGTCACATACCGGCGCACAGTCAGGGAGTGGCTCAACTAGCACTGATGAATTTCTGACAGCTAAACCAACTGGAGCTACCACCACACCTATTAGCAATGCGGAGCCTCCAAAAGTAGTCAATGTAACCACTATGTTGACATCAGCTGTGCCACAGGCTCGCAAAGCATCCTTGGCCCGGTTTTTGGAAAAGCGTAAGGAAAGGGTGATGAATGCAGCACCATACAAAAAACCTGAGGAGTTTGCCACTGCAGAATACAATGGTGCTAACTTCATTGCAATTACTGCTTCTAATTCTCTTCCACCCAAGCAATAA 1056 0.447 MNTLCVYCVGFAKNSAAQWLFSNKVSTVPHLMSFKAYRDDKAKKMVTNISADAFDSSKKHSAGEPLKSFNHDGQGGFHFPPTSYPVQHDVNFVNHPHDVKMFSVSNQAITGNPFLKSHFATADPNMNGVNVKQPLFGGIPVTAPHSVLPAIGSIAAMTESCNGVIPSASSAQLTIFYAGTVNVFDDISAGKVQAIMLMAGNGFSVASNTEQPKVLAPGSKLTADDCVPMIQATSAAPSSGLSSPLSVSSHTGAQSGSGSTSTDEFLTAKPTGATTTPISNAEPPKVVNVTTMLTSAVPQARKASLARFLEKRKERVMNAAPYKKPEEFATAEYNGANFIAITASNSLPPKQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0989 351 MobiDBLite consensus disorder prediction 235 282 - -
Lal16g0989 351 Pfam tify domain 168 200 IPR010399 -
Lal16g0989 351 PANTHER PROTEIN TIFY 7 11 342 - -
Lal16g0989 351 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Lal16g0989 351 Pfam Jas motif 298 322 IPR018467 -
Lal16g0989 351 SMART tify_2 166 201 IPR010399 -
Lal16g0989 351 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 342 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0989 Lal-Chr16 6580176 6583077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0989 19 322 Tify Gene Family AT3G17860 35.736 1.50e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal16g0989 tify 2.9e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0989 16 6580176 6583077 Lal16g0989 16 6580176 6583077 ECH
Lal16g0989 16 6580176 6583077 Lal15g0977 15 7720569 7724960 LSH