Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0986 ATGGGTTCTGAAGGATCCACCGTTGTTGTCCCTAGGAGTTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATGTATACATGCAGTCGTGGACTGGTACTATTATTGGGCCTCCTGGTACTGTTCATGAAGGGCGTATCTACCAGTTGAAATTGTTTTGTGGCCAGGATTATCCTAACAATCCGCCATCTGTTAGATTTCAAACAAGGATTAACATGACTTGTGTCAACCAAGAAACTGGAATGGTTGATCCACATTTGTTTCCCATGCTTGCTAATTGGAAAAGAGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGACGTCTCCACAAAACCGGAAGCTAGCTCAGCCTCTTGAAGGCAATGAAGAAGGCAGGATTGACCAGAAGGGGCTGGTGCTGAGATGTTGTATCATGTAA 480 0.4313 MGSEGSTVVVPRSFRLLEELERGEKGIGDGTVSYGMDDADDVYMQSWTGTIIGPPGTVHEGRIYQLKLFCGQDYPNNPPSVRFQTRINMTCVNQETGMVDPHLFPMLANWKRECTMEDILMQLKKEMTSPQNRKLAQPLEGNEEGRIDQKGLVLRCCIM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0986 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Lal16g0986 159 SUPERFAMILY UBC-like 8 139 IPR016135 -
Lal16g0986 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Lal16g0986 159 SMART ubc_7 14 158 - -
Lal16g0986 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Lal16g0986 159 Pfam Ubiquitin-conjugating enzyme 41 136 IPR000608 -
Lal16g0986 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0986 Lal-Chr16 6563170 6567724 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0986 16 6563170 6567724 Lal16g0986 16 6563170 6567724 ECH
Lal16g0986 16 6563170 6567724 Lal15g0968 15 7632160 7638032 LSH