Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0985 ATGCTATGCTTGGTATCTCGTTCAGGAAGGGAGTTGCAGAGATACAACAACAAGGGTGGTCGCCAAGTTGTAGGATGCATACCTTATAGATATAAAGAAGACATGGATGGTATTATGAGCAAGGAATTGGAAGTACTAGTGGTTAGTTCACAGAAAGGTCAAGCATTCATGTTTCCAAAGGGAGGATGGGAACTTGATGAAACCTTAGAACAAGCAGCTTCTAGGGAGTCTCTTGAAGAAGCCGGGGTCATAGGAATCGTTGAGCATACATTAGGTCAATGGAACTTTATTAGCAAACGACATGGCATATACTATGAAGGGTACATGTTCCCCTTGTTTGTCAAGGAACAACTTGATCTATGGCCAGAGAAAAATTTGAGGATAAGAATATGGATGACCATTGCTCAAGCCAGAGAAGCTTGTCAGCATTGGTGGATGAAGGAAGCATTAGATATATTGGTTAAACGAATCACAAAAAATATTAGCATCAATTGA 495 0.404 MLCLVSRSGRELQRYNNKGGRQVVGCIPYRYKEDMDGIMSKELEVLVVSSQKGQAFMFPKGGWELDETLEQAASRESLEEAGVIGIVEHTLGQWNFISKRHGIYYEGYMFPLFVKEQLDLWPEKNLRIRIWMTIAQAREACQHWWMKEALDILVKRITKNISIN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0985 164 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Lal16g0985 164 CDD Nudix_Hydrolase_9 22 147 - -
Lal16g0985 164 SUPERFAMILY Nudix 17 156 IPR015797 -
Lal16g0985 164 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 160 - -
Lal16g0985 164 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Lal16g0985 164 PANTHER NUDIX HYDROLASE 17, MITOCHONDRIAL 1 160 - -
Lal16g0985 164 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Lal16g0985 164 Pfam NUDIX domain 41 148 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0985 Lal-Chr16 6559304 6561274 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0985 16 6559304 6561274 Lal16g0985 16 6559304 6561274 ECH
Lal16g0985 16 6559304 6561274 Lal23g0653 23 9234603 9236969 LSH