Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0984 ATGGTTAATTCCAAGGCGGCAATTTCTTCATTAACCCACTTGCGTCCTCTAACATACGCCGCTTCAGCAACTTCTTCTTATCCTGCACAACTAGTGCCCGATCCACCTAATCTCATCGCATGGGTAACCAGAGAAGGTGGCTACGTGCACCCCGCGTTGAAGATAGCACACTCTCATCACTTCAATGGTCTCGGACTAGTATCCAATCAACAAATTCCAGCTGGCACTAACCTTATTATTCTCCCCGATCATATTCCTTTGAGTTTTAGGTCTTTTGAATCTGAAGATAGCGTTGATTATGCGTTGGCTCAATTGGCACGACAAGTTCCTGAGGAACTATGGGCAATGAAACTTGGTTTGAAGCTTCTTCAAGACAGAGCAAAAGTTGGATCATTTTGGTGGCCATATATAAGCAATCTCCCACAAACATACAGTGTGCCTATCTTCTTTCCTGGGGAAGACATAAAGAACTTGCAGTATGCTCCTGTGCTTCACCAGGTAAACAAAAGATGCCGGTTTCTTCTTGATTTTGAGCAAGAAATCAAGCGCACCTTAGTTAATCTTGAACCAGATAAGCATCCTTTTGGTGGTCTAGAAGTGCATGCATCTTCTCTTGGATGGGCAATGTCAGCAGTTTCATCTAGAGCATTCCTGTTATACGCCCAAATGCCAGAATTGTTCAGGAACAAGATACCGGTTGTGGCTGAGATGCCTCTCAAAGAAGATGAGCCTTTATTACTTAACTATGGCCGTTTAAGCAATGATTTTTTCCTTCTTGATTATGGGTTTGTGATACATTCGAACCCTTATGATTGCATTGAGCTCAAATATAATGGTGCTCTTCTGGATGCTGCAAGCATGGCAGCTGGAGTTTCTTCACCAAACTTCTCAGCACCTGCTCCATGGCAGGAACTGATTTTATCTCAGCTAAATCTAGCTGGAGAAGCTCCAGACCTCAAGGTAACAATAGGCGGTCAAGAAATAGTAGAGGGCCGCTTGTTGGCTGCAATGAGAGTACTACTAGCAAATGATATGGAAACTGCACCGAACTATGACCTGAACACACTCAAGTCTTTATCAGCTGAAGCTCCACTTGGTGTTGCAAATGACATAGCTGTATTTCGCACCCTAATTGCTCTCTGTGTCATTGCACTAGGACATTTCCCTACCAAAATAACGGATGATGTATCACTGTTGGAGCAGGGTGTTTCAGGATCAAATGAGTTAGCTATTCAGTTCAGAATCCAAAAGAAATCTCTGATTGTAGATGTAATGAGAGAGAGCTCTCAAGGAGGGTAA 1299 0.4326 MVNSKAAISSLTHLRPLTYAASATSSYPAQLVPDPPNLIAWVTREGGYVHPALKIAHSHHFNGLGLVSNQQIPAGTNLIILPDHIPLSFRSFESEDSVDYALAQLARQVPEELWAMKLGLKLLQDRAKVGSFWWPYISNLPQTYSVPIFFPGEDIKNLQYAPVLHQVNKRCRFLLDFEQEIKRTLVNLEPDKHPFGGLEVHASSLGWAMSAVSSRAFLLYAQMPELFRNKIPVVAEMPLKEDEPLLLNYGRLSNDFFLLDYGFVIHSNPYDCIELKYNGALLDAASMAAGVSSPNFSAPAPWQELILSQLNLAGEAPDLKVTIGGQEIVEGRLLAAMRVLLANDMETAPNYDLNTLKSLSAEAPLGVANDIAVFRTLIALCVIALGHFPTKITDDVSLLEQGVSGSNELAIQFRIQKKSLIVDVMRESSQGG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0984 432 Gene3D set domain protein methyltransferase, domain 1 10 263 - -
Lal16g0984 432 PANTHER F21J9.27 231 427 - -
Lal16g0984 432 PANTHER F21J9.27 5 233 - -
Lal16g0984 432 SUPERFAMILY SET domain 33 268 IPR046341 -
Lal16g0984 432 Gene3D - 300 430 IPR036464 -
Lal16g0984 432 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 231 427 - -
Lal16g0984 432 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 233 - -
Lal16g0984 432 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 260 424 IPR036464 -
Lal16g0984 432 Pfam Rubisco LSMT substrate-binding 299 419 IPR015353 -
Lal16g0984 432 CDD SET_LSMT 52 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0984 Lal-Chr16 6551216 6557387 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0984 16 6551216 6557387 Lal16g0984 16 6551216 6557387 ECH
Lal16g0984 16 6551216 6557387 Lal15g0964 15 7553544 7558361 LSH