Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0975 ATGGATAAAGGCATAGTTGATAAAGCACTAAACAGTTTAGGCAAAGGCTTTGATTTGGCATCAGATTTCAGACTGGAATTCTGCAAAGGTGAAAAGCGTTTGGTTATTCTTAATGAAACAATGAGAAGAGAGATTATGGTACCAGGTTTTGGACCAGTCACAGATGTATCAATTGATATAAAATGTGACAAAGGTGATCGAATTCGGTATCAGTCTGATATCCTCACCTTCACCCAAATGTCGGAGCTGTTCAATCAGAAAAGCTCAATACCTGGGAAAATTCCATGTGGGTACTTCAATACGATGTTTGGGTTTGATGAATGTTGTTGGGCAAGTGACGCAGCTAACACCAAATGGTTGGGTCTTGATGGCTATTTTATAACACTCTTCAATCTTCATATTGATCGGTACCCACTAGTTCTATCCAAACACGTCCTTCAAGCTGTTCCTTCTTCTTGGGATCCTCCTGCACTTGCCAGATTCATTGAGAAATTTGGGACACACATCCTAGTGGGGCTTGGCATTGGTGGCAAAGATTTGGTACTTGTCAAGCAAGACATGTCTTCCAACTTGGCACCATCAGAACTCAAAAATCACTTGGATGAGCTTGGAGATCAATTATTCACTGGCACATGCAATTTTGTCCCAAAAACAAAAGAGCATAAATGCAAGGTACCACAAGCTTTTGATGTCTTTGGTTCTCAAATTGTTGCCTTCAATAGCTCCACATCAGTTTGTGCAAAAGATGTAGTTCCTAATAAACCAGATGCTGTTGATTTTAGCTTCATTCCCATCACTTCTCTTCTTAAAGCTGTTCCTGGCAGAGGCTTCCTATCCCATGCCATCAACCTATACCTTAGGTATAAGCCTCTTATGTCAGATCTGTCATACTTTCTTGACTTCCAAGCACAGAAACTTTGGGCTCCAATTCACAATGATCTTCCTCTTGGTCCAACCACAAATAGAACAACTACTTTCCCTTCTCTCAGGTTCAATTTGATGGGTCCCAAGCTTTATGTAAACACAACTAAGGTAATAGTAGGCAAAAGACCAATCACAGGAATGCGTTTGTTTCTTGAGGGCATGAAATGCAACAGATTAGCCATACACCTACAACATCCATTGAAAACTCCAATGATGCTTGACAACATAATAGAGGAGAACACAATATGGTCAGAAGAAATCAATGATGACCATTTCTGTGAAGCAATTAATGGAATGAAATTTTCACATGTATGTACTGCACCAGTGAAATACAATCCTAGTTGGAGCTTTGATCACAAAAATGTAGCCTTTATTGTCACAGGGGCACAACTTCATGTGAAAAAACATGAATCAAGGAGTGTCCTACAACTAAGGTTATTGTTCTCTAAAGTTTCTAATTGTATTGTTGTAAAATCAAATTGGACACAAGGATCCTCTGGGTTGTCCCAAAAATCTAGCATTTTCTCATCAATGAGCACATCAATGTCTAGTAGTAAAGATCAGAAAACTTCTGCTATAGTTGTGGATTCTAGTGTGTTCCCAAGTGAGCCTCCAGTGCCAGTGCAAGCCCAAAAGCTGTTGAAATTTGTAGATATTTCAGAATTATGTAAAGGCCCACAAGATAATCCTGGCCATTGGATAGTGACTGGAGCAAGATTGGTATTGGATAAGGCTTTTGCTTTCTTCCTTTACTCTCACACATACCCATCTTCTCTCATGGCTTCTGAATCCTCCAAATCCATTTTTGATTTCACTGTCAAGAACATCAAGGGAAATGATGTGAGTCTGAGTCAATACCGTGGAAAGGTTCTACTGATCGTGAATGTTGCCTCGGAATGTGGTTTGACACAAACAAATTACAAAGAATTGAGTGTACTGTACGAGAAGTACAAGGGTCAAGATTTTGAAATCTTGGCATTTCCATGCAACCAGTTTGGTAGTCAGGAACCAGGAACCAATGAAGAAATTGAGCAAACTGTATGTACAAGGTTCAAAGCCGAGTTTCCCATCTTTGATAAGGTTGAAGTCAATGGAAAGAATGCAGCACCAATTTATCAGTTCTTGAAGAGCCAGAAAGGAGGAATATTTGGAGATGGTATCAAGTGGAACTTCACAAAGTTCTTGGTAGACAAAGAAGGAAAAGTTGTTGACAGATATGCTCCTACAACCTCACCTCTAAAAATAGAGGAGGCCATATGCAATCTCTGCAAAGGACAAGTTGCTTCTCAAAGCTCTCTATGA 2226 0.3971 MDKGIVDKALNSLGKGFDLASDFRLEFCKGEKRLVILNETMRREIMVPGFGPVTDVSIDIKCDKGDRIRYQSDILTFTQMSELFNQKSSIPGKIPCGYFNTMFGFDECCWASDAANTKWLGLDGYFITLFNLHIDRYPLVLSKHVLQAVPSSWDPPALARFIEKFGTHILVGLGIGGKDLVLVKQDMSSNLAPSELKNHLDELGDQLFTGTCNFVPKTKEHKCKVPQAFDVFGSQIVAFNSSTSVCAKDVVPNKPDAVDFSFIPITSLLKAVPGRGFLSHAINLYLRYKPLMSDLSYFLDFQAQKLWAPIHNDLPLGPTTNRTTTFPSLRFNLMGPKLYVNTTKVIVGKRPITGMRLFLEGMKCNRLAIHLQHPLKTPMMLDNIIEENTIWSEEINDDHFCEAINGMKFSHVCTAPVKYNPSWSFDHKNVAFIVTGAQLHVKKHESRSVLQLRLLFSKVSNCIVVKSNWTQGSSGLSQKSSIFSSMSTSMSSSKDQKTSAIVVDSSVFPSEPPVPVQAQKLLKFVDISELCKGPQDNPGHWIVTGARLVLDKAFAFFLYSHTYPSSLMASESSKSIFDFTVKNIKGNDVSLSQYRGKVLLIVNVASECGLTQTNYKELSVLYEKYKGQDFEILAFPCNQFGSQEPGTNEEIEQTVCTRFKAEFPIFDKVEVNGKNAAPIYQFLKSQKGGIFGDGIKWNFTKFLVDKEGKVVDRYAPTTSPLKIEEAICNLCKGQVASQSSL 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0975 741 ProSitePatterns Glutathione peroxidases active site. 596 611 IPR029759 -
Lal16g0975 741 ProSitePatterns Glutathione peroxidases signature 2. 633 640 IPR029760 -
Lal16g0975 741 PRINTS Glutathione peroxidase family signature 594 611 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 PRINTS Glutathione peroxidase family signature 630 646 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 PRINTS Glutathione peroxidase family signature 695 704 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 CDD GSH_Peroxidase 575 727 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 Pfam MAC/Perforin domain 99 206 IPR020864 -
Lal16g0975 741 Gene3D Glutaredoxin 567 733 - -
Lal16g0975 741 ProSiteProfiles Glutathione peroxidase profile. 566 737 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 SUPERFAMILY Thioredoxin-like 575 727 IPR036249 -
Lal16g0975 741 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 299 IPR020864 -
Lal16g0975 741 PANTHER OS02G0736300 PROTEIN 251 553 - -
Lal16g0975 741 PANTHER OS02G0736300 PROTEIN 3 250 - -
Lal16g0975 741 Pfam Glutathione peroxidase 576 684 IPR000889 GO:0004602|GO:0006979
Lal16g0975 741 ProSiteProfiles Thioredoxin domain profile. 570 732 IPR013766 -
Lal16g0975 741 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 3 250 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lal16g0975 741 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 251 553 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0975 Lal-Chr16 6489944 6502671 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0975 16 6489944 6502671 Lal16g0975 16 6489944 6502671 ECH
Lal16g0975 16 6489944 6502671 Lal15g0954 15 7430581 7439978 LSH