Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0974 ATGGTGTCAAGATCTTATTCAAATCTATTGGAACTGGCTTCTGGTTTGTCTCCATCATTTGAACAGATGAACAGGAGAATTCCAAGGATCATGACTGTGGCTGGGTTGATATCTGAGGTTGATGATGATGATGAGCATGTGGAAAGTGTGTGTTCTGACCCTTCTTCCTCATCAGTCCAAAGAGAAAGGATCATAATAGTGGCAAATCAGCTTCCTATAAGGGCTCAAAGGAAACAAGATGGTAACAGGAATTGGTCTTTTACTTGGGATGAGAATTCACTTCTTCTTCAACTTAAAGATGGATTAGGGGATGAAGATACTGAAGTTATTTATGTTGGATGCCTCAAAGAGGATGTGCACCCAAATGAACAAGAAGAGGTTTCACAGATACTACTTGAGACCTTTAAATGTGTCCCAACTTTTCTCCCACCTGATCTATTTACCAGGTACTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTCCATTATATGTTGCCTCTGTCACCAGAACTTGGTGGCAGGTTTAATAGATCATTGTGGCAGGCTTATGTCTCGGTGAATAAGATTTTTGCAGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTTATGGTGTTGCCTACTTTCTTGAGGAAGAGGTTTAATAGAGTAAAACTTGGATTCTTCTTACATAGCCCATTCCCTTCATCAGAGATATATAAGACATTGCCTATTAGGGAAGAGCTCTTGAGAGCACTCCTCAATTCAGATTTGATTGGATTCCACACTTTTGATTATGCCAGGCATTTTCTCTCATGTTGTAGTAGGATGCTTGGTCTTACTTATGAATCCAAAAGGGGTTATATTGGTCTTGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTTGGAATACACATGGGTCAGCTTCAATCAGTTTTGAGCATGCCAAAGACTGAAGAAAAAGTTTGTGAGCTTGTTAAACAGTTTTCTGATCAAGGGAAGATAATGTTGCTTGGTGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGCTTTTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAGTGTCAAGGAAAGGTTGTGTTGGTGCAGATAGCTAATCCTGCAAGGGGAAAAGGGAAAGATGTGAAAGAAGTGCAAGCCGAGACGAAAGCAACCGTGAAGCGTATTAATGAAAAATTTGGGAAGCCTGGTTATGATCCTGTGATTCTGATCGAGGAGCCACTCAGGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCTGAGTGTTGTTTAGTCACTGCAGTGAGAGATGGGATGAATCTCATTCCATATGAATATATAATTAGTCGCCAAGGCAATGAAAGGTTGGATAAAGTTTTGGAACTAGGTTCCTCCCATAAGAAAAGCATGTTGGTTGTGTCTGAGTTCATTGGTTGTTCCCCATCTTTAAGTGGAGCAATTAGAGTGAACCCTTGGAATATTGATGCAGTGGCAGATGCAATGGATTCTGCACTGGAAATGGTTGATTCAGAGAAACAACTTAGGCATGAGAAGCATTACAGATATGTTAGTACTCATGATGTTGGGTATTGGGCTCGTAGCTTCTTGCAAGATTTGGAGAGGACTTGTCGCGATCATGTACGGCGAAGGTGGTGGGGGATTGGATTTGGACTAAGTTTTAGAGTTGTGGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAGCGGACAAAAACTAGAGCAATCCTTCTAGATTATGACGGCACACTAATGCCTCAGGCTTGTATTGATAAGAGTCCAACAAGTGATTGCATTAAAATGCTTAACATTTTGTGTAGAGATAAGAACAACATGGTGTTTCTGGTCAGCGCTAGAAGCCGAAAGACACTCACTGAATGGTTTTCTCCTTGTGAGAAACTCGGAGTTGCTGCTGAGCACGGTTACTTTCTAAGATTAAAACGAGATGCAGAATGGGAAACGTGTGGACCTGCAACAGATTGTAGTTGGAAGCAAATTGTCGAGCCTGTGATGAAGCTGTATACTGAAACTACTGATGGATCGACTATTGAAGATAAGGAGACATCACTTGTCTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCATCTCGAAAGTGTTCTTGCAAATGAACCGGTAACAGTAAAGAGTGGTCAGAATATTGTAGAAGTTAAACCACAGGGTGTAAGCAAGGGACTTGTGGCAAAACGCCTACTTTCTACAATGCAAGAAAAGGAAATGTCACCTGATTTTGTTTTGTGCGTGGGAGATGACAGGTCTGATGAAGACATGTTTGAGGCAATCACTAGTTGCATGGCTGGTACTTCCATGGCGCCCCGAGCTGAAGTATTTGCATGCACCGTTGGTCGAAAGCCGAGTAAGGCTAAGTACTATCTGGATGACACTGCTGAAATAGTGAGATTAGTGCAAGGTTTAGCATCTGTTTCAGAGCAAACAGTTTTATTTTAG 2568 0.4132 MVSRSYSNLLELASGLSPSFEQMNRRIPRIMTVAGLISEVDDDDEHVESVCSDPSSSSVQRERIIIVANQLPIRAQRKQDGNRNWSFTWDENSLLLQLKDGLGDEDTEVIYVGCLKEDVHPNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSMPKTEEKVCELVKQFSDQGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPECQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINEKFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNERLDKVLELGSSHKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMVDSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTKTRAILLDYDGTLMPQACIDKSPTSDCIKMLNILCRDKNNMVFLVSARSRKTLTEWFSPCEKLGVAAEHGYFLRLKRDAEWETCGPATDCSWKQIVEPVMKLYTETTDGSTIEDKETSLVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSTMQEKEMSPDFVLCVGDDRSDEDMFEAITSCMAGTSMAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLVQGLASVSEQTVLF 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0974 855 Pfam Trehalose-phosphatase 601 835 IPR003337 GO:0003824|GO:0005992
Lal16g0974 855 CDD HAD_TPP 599 840 - -
Lal16g0974 855 TIGRFAM T6PP: trehalose-phosphatase 596 845 IPR003337 GO:0003824|GO:0005992
Lal16g0974 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 852 IPR001830 GO:0003824|GO:0005992
Lal16g0974 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 554 - -
Lal16g0974 855 Pfam Glycosyltransferase family 20 63 551 IPR001830 GO:0003824|GO:0005992
Lal16g0974 855 Gene3D Glycogen Phosphorylase B; 318 535 - -
Lal16g0974 855 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 600 801 IPR006379 -
Lal16g0974 855 CDD GT20_TPS 63 551 IPR001830 GO:0003824|GO:0005992
Lal16g0974 855 Gene3D - 730 853 IPR023214 -
Lal16g0974 855 Gene3D - 597 729 IPR023214 -
Lal16g0974 855 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 852 - -
Lal16g0974 855 Gene3D Glycogen Phosphorylase B; 55 317 - -
Lal16g0974 855 SUPERFAMILY HAD-like 598 845 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0974 Lal-Chr16 6484297 6488499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0974 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.694 0.0 1464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0974 16 6484297 6488499 Lal16g0974 16 6484297 6488499 ECH