Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0971 ATGAGCCGGCCAATGGATGAAGATGTGGTTACTAAGAATGAGGAAGAAGAATTCAACACTGGACCTCTGTCTGTACTGATGATGAGTGTTAAAAATAATACCCAGGTTCTGATTAATTGCCGTAACAATAAAAAACTGCTGGGTCGTGTTAGAGCTTTTGATAGGCACTGTAACATGGTCCTTGAAAATGTCAGGGAGATGTGGACTGAGGTGCCTAAGACTGGTAAGGGGAAGAAAAAGGCTCAGCCAGTTAACAAGGACAGATTCATCAGCAAAATGTTCCTCCGTGGTGATTCTGTCATCATTGTTCTTAGAAATCCCAAATAA 327 0.4159 MSRPMDEDVVTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0971 108 Gene3D - 16 108 - -
Lal16g0971 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 - -
Lal16g0971 108 Pfam LSM domain 29 103 IPR001163 -
Lal16g0971 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Lal16g0971 108 SMART Sm3 26 105 IPR001163 -
Lal16g0971 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
Lal16g0971 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 IPR027248 GO:0008380|GO:0030532
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0971 Lal-Chr16 6459375 6461304 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0971 16 6459375 6461304 Lal16g0971 16 6459375 6461304 ECH
Lal16g0971 16 6459375 6461304 Lal15g0947 15 7370658 7372391 LSH
Lal16g0971 16 6459375 6461304 Lal23g0671 23 9385747 9388834 LSH