Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0969 ATGTCTCTCCCACCAGTACACTATCTATATATCACAGAGGATTCTCTTCGCGAATGGAAGAGTGGAAACCCTAATCTCAAGATCTCAGAACCTGTTCTGTTGCTTCGATTCCTCTACGAGCTTTGCTGGACTATGGTTCGGGGTGAATTGCCATTACAGAAGTGTAAAGTAGCATTAGATTCTGTCAGATTCTCAGAGAAAGCTTCCACTGTGAAATTAGCTTCAAATTTTGCAGATATAGTAACCCAGATGGCTCAAGATCATACAATGTCAGGAGAGTTCCGCTCCCGTCTCATCAAACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGCTGTGAGGAAGAGTTTTTGGGGGATGCTGAATTGATCAAAATAAAGGCTCAAGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACACGGCTTCTATATCAGCAAACCAAATTTAATCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTCACTCTTCTTTGCCGGGATTCTGAAGTTCCAACTCAAAAGGCATCTGCAGCAACAATTGGCATTATTAAGTCGTTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTTCTTGAGTGCTTTGAACTTCAGTCTGATAGCGATTTGTTTTTGGACCTCATTCCTATTTTTCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTCCAATATTATCAGCGCATGGAAGTGAGCAATTCTGTTCCATTTGGGCTCTATAAACTTACAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGATAGCATATATGCACATCTACTTCCCGGGGATGATGAAGCATTTGAGCATTATAACAGTTTCTCTTCCAAGCGTCTTGATGAGGCTAACAAAATTGGAAAAATAAACCTTGCTGCTACTGGGAAAGATCTTATGGATGATGAGAAACCGGGTGATGTCACAATAGATCTCTTTGCTGCTCTAGACATGGAAACTGATGCAATTGAAGAACGAACGTCTGAGCTTGAAAACAGTCAAACATTGGGCTTGCTTACTGGCTTTCTTTCAGTAGATGACTGGAATCATGCGCATACACTATTTGACCGCCTTGCACCACTTAATACAGTGGAACATAACCAAATATGTGGCAGTTTGTTTAGGCTTATTGAGAAGTCAATTTCATCAGCATATGATGCTATTCGTCAAGCACGTCTTCAAAAGTCTGGGTCATCGATAGGAGGTGGCACTGATGCTATGGATGTAGATAACTCTTCGGGAGATGGCTCTTTCATTGATCTCCCAAAGGAACTTTTTCAGATGCTTGCTTGTGCTGGACCTTATCTCTACCGTGATACTATGTTGTTGCAGAAGGTTTGTAGAGTGTTGCGAGGTTATTATCTTTCTGCTCTTGAACTTGTAAGCGGTGGGGATGGTGCTTTAAATCCTCATATACACCTTAAGGACGCAAAGCTAAGGGTGGAAGATGCTTTAGGAACATGTCTACTTCCTTCTCTGCAGCTGATTCCTGCCAATCCAGCCGTCGGCCACGAAATTTGGGAACTATTGAGTCTCCTTCCTTATGAGGTGCGGTATCGTTTATATGGTGAATGGGAAAGAGATGACGAGCGCTTTCCAATGCTCTTGGCTGCGAGACAAACTGCAAAGTTGGACACTAGACGCATTTTGAAACGACTAGCAAAAGAAAACTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAATCCTATGACAGTCCTTCGGACAATTGTTCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTATTTAACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATCGAGCGATTAGCACTTGGTGGACGTGATAAGTTAAAGGATGATGGTCTTAATTTGTCAGATTGGCTTCAATCACTAGCTTCATTTTGGGGCCACTTGATGCAGATCAACCTTAACGAATGCAGGATTGCTGGACATAGCAGCATTTTGTATCCCCGAGTGCTGATGTGTAAGAAGTACCCATCAATGGAATTAAGGGGCCTTTTCCAATATCTTGTGAACCAGTTGAAAAAGGGGCAAGGAATTGAGCTTGTTCTGCTGCAGGAGCTCATTCAACAAATGGCAAATTTCCAGTACACTGAGAATTTGACTGAGGAACAACTGGACGCTATGGCAGGGAGTGAAACTCTCAGATATCAAGCAACTTCTTTTGGAGTAACTCGAAATAATAAGGCACTGATAAAGTCAACTAGCAGACTTAGAGATTCATTACTGCCAAAAGATGAACCGAAGTTGGCAGTTCCCCTCTTATTGCTTATTGCTCAGCATCGTTCTCTGGTTGTCATCAATGCAGATGCACCCTACATTAAGATGCTTAGTGAGCAGTTTGATAGATGCCATGGAACTCTTCTTCAATATGTGGATTTTCTTTGCAGTGCTGTTTCACCAGCATCGAATTATGGTGTTCTTATTCCCTCACTCAATGACCTGGTCCATCTTTACCACATGGACCCAGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGGCTTTTCAAGTCTCAGAAGGCTCCTGATGTTTGCTGGCCCTTGGATGATAAAAATGCTGAAAGTGATGCTTCTATAAACTCTGAGTCTGACCCTGCAGATCATTCTAGCAGTATGGTTCTAGATCTTGGTGCTGCTCAGAATCCTATAAGTTGGTCATATCTTCTTGATACTGTTAAAACCATGTTACCTTCAAAAGCATGGAATAGCCTGTCTCCTGATCTTTACGCAACATTCTGGGGTCTCACATTATATGATCTGTATGTTCCGAAAAATTGTTACGAGTCTGAAATTGCCAAGTTGCATGCTAACCTCAAGTCTTTGGAGGAGCTTACTGATAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGACTGATTAATGAACTTCATAAACATGAAGAGCATGTTGCATCTGTTCGTAGACGCCTTTCTCTTGAAAAAGACAAATGGTTAAGTTCCTGTCCTGATACCTTGAAGATCAACATGGAGTTTCTTCAGCGTTGTATCTTTCCACGCTGTACTTTCAGTATGCCTGATGCTGTTTATTGTGCTATGTTTGTGCACACTCTTCATTCCATTGGTACCCCCTTTTTCAATACGGTCAACCACATAGATGTTCTGATTTGTAAGACCCTACAACCAATGATATGCTGTTGCACTGAGTACGAAGCAGGCAGACTTGGCAGGTTTCTGTATGAAACATTGAAGATTGCTTACTATTGGAAGAGGGATGAGTCTATTTATGAACGTGAGTGCGGAAACATGCCAGGCTTTGCTGTTTATTATAGATATCCAAACAGCCAGCGAGTTACGTATGGGCAGTTCATCAAGGCAAGTGTACACTGGAAGTGGATTCAAAGAATCACGCGGTTACTGATTCAGTGTTTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTCATCATGTTGACAAAAATCTCCAGTGTTTTCCCTGTTACTCGTAAGAGTGGGATAAACCTTGAAAAGCGGGTTGCTAAGATTAAAACTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTTCCAGGAAGCCTTCTTGGGTTACCGATGAAGAATTTGGTATGGGTTATCTCGAGTTGAAGCCTGCGCCATCTATTGCTAAATCTTTAGCTGGAAATTCAGTAGCAGTACAAAGTGGGACGGGTATTGGTGTTTCTCAATCGGAATCTTCCAGTGGAAAACATTTGGGCTCTGGAAACACCGTCAAAGGCCAGATAATAAGAACAAAACCTGCAGACAGCAAGTCAGAAAGAAGTGAAAGCACTTCTGTGACAAAATATGAATCTGTAGTAGTAAAAACCAAGGGTAGTTCAATGGTGAATGGATTGGATGCTCAATCATCGTTACCCTTGTCTACTGTACATACCGGAGCATCAAAATCTATGGAAAACCAAAAGCTAGTGGAAGAATCCGTAAATAGAGCATCAGATGAACACATGACAAGAGTTGCTGAGTCAAGAAATTCCACAAAACGCTCAGGGCCTGCTGGCCCAGTTTCGAAGCCCTCAAAACATGATCCTGCAAAAGAGGATGGTAGATCTGGAAAAGCTGTTGCTAGAACTTCTGGATCGTCAAGCATTGACAGGGATCTACAAACTCATGCATCAGATGGAAGACACATTGGAAATACCAATGTATCTTCTTCAGTCAATGCTAATGGTAGCGCCATTGCAGGTTCTATGAAAGGCTCAGCTCCATCACCGAAGATCGACAGTCCTGGTAATGAATCGAAGGCAGAGGTTTTACCTGCTAAGTCTTCTGATGTTAGGGCTTCTATGGTTAAGGATGACAGAAATGATGTTGCTGACTTGCCAAGAGGATCCTCTTCTCGTGTTGTTCATTCCCTTGGGCATGACATGGCAGTTGTTACTTATAAGTCTAGTGATAAAGTTCAGAAGAGAGCTGGTTCTGCTGAAGAACCAGATAGACTAGGTAAACGGCGGAAAGGGGATGTAGATCTAAGAGAAGTAGAGGGTGAAGTTCGATTCGCTGAAAGAGAGAAGCTGGTGGATCCTCGATTGGCTGATGACAGGTCAGGACCTGATGAACTTGGGGTGTACAGGACAGGTGATAAGCCATTGGAAAGGCCAAAAGAAAAAGGCAATGAGAGATATGAAAGGGAACACAGGGAAAGATTGGACCGTCTGGATAAGTCTCATGAAGATGATTTCATTGTGGAAAAATATAGGGATAGGTCAATAGAAAGATATGGAAGAGAAAGGTCTATTGAGAGAATACAAGAGAGGGGTAGTGATAGGAGTTTTAATAGAGTCCCTGAGAAGGCTAAGGATGATAGAAGTAAGTTACGATACAGTGATGCACCTGTAGAAAAACTTCATGCTGATGATCGCTACCATGGACAAAGCTTGCCTCCACCACCCCCTTTACCTCCTAATATTGTTCCACATTCTGTTGGTGCGAATAGGCGTGATGAAGACTCTGATAGGAGGTATGCAGCTACAAGACATTCTCAAAGGCTTTCTCCTAGGCATGAAGAAAAAGAACGAAGGCAGTCTGAAGAAACTGTGGTTTCTCAGGATGATGCCAGGCGCAGAAAAGAAGATGATTTTCGAGATCGGAAACGTGAGGAACGAGATGGATTGTCAATGAAGGTGGAAGAGAGGGACAGGGAGAGAGAAAGAGACAAAGCAAACCTTTTAAAGGAAGATTTGGACTTAAATGCTGCATCCAAGAAGCGTAAACTTAAGAGGGAGCATCTACCCGCAAGTGAACCTGGGGAGTACTCACCAGTGGCCCCTCCACCTCCTCTCCAGGGTGGTGGTATTTCACAAGCATATGATGGAAGAGACAGGGGAGACAGAAAGGGTCTCATAATTCAGCATGCAAGTTACATGGATGAACCTGGTCTCAGGATTCATGGTAAAGAGGTTGCCAGCAAGCTGAATCGCCGTGATCCTGATCCCTTGAATGACCGAGAATGGGATGATGAGAAGAGACAAAGGGCTGATCAAAAGAGAAGGCACAGGAAATAG 5673 0.4268 MSLPPVHYLYITEDSLREWKSGNPNLKISEPVLLLRFLYELCWTMVRGELPLQKCKVALDSVRFSEKASTVKLASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGDAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEVPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQSDSDLFLDLIPIFPKSHASQILGFKFQYYQRMEVSNSVPFGLYKLTALLVKQDFIDLDSIYAHLLPGDDEAFEHYNSFSSKRLDEANKIGKINLAATGKDLMDDEKPGDVTIDLFAALDMETDAIEERTSELENSQTLGLLTGFLSVDDWNHAHTLFDRLAPLNTVEHNQICGSLFRLIEKSISSAYDAIRQARLQKSGSSIGGGTDAMDVDNSSGDGSFIDLPKELFQMLACAGPYLYRDTMLLQKVCRVLRGYYLSALELVSGGDGALNPHIHLKDAKLRVEDALGTCLLPSLQLIPANPAVGHEIWELLSLLPYEVRYRLYGEWERDDERFPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLMQINLNECRIAGHSSILYPRVLMCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANFQYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSTSRLRDSLLPKDEPKLAVPLLLLIAQHRSLVVINADAPYIKMLSEQFDRCHGTLLQYVDFLCSAVSPASNYGVLIPSLNDLVHLYHMDPEVAFLIYRPVMRLFKSQKAPDVCWPLDDKNAESDASINSESDPADHSSSMVLDLGAAQNPISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNCYESEIAKLHANLKSLEELTDNSSSAITKRKKEKERIQESLDRLINELHKHEEHVASVRRRLSLEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSIGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKRDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKASVHWKWIQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKTDEREDLKVLATGVAAALASRKPSWVTDEEFGMGYLELKPAPSIAKSLAGNSVAVQSGTGIGVSQSESSSGKHLGSGNTVKGQIIRTKPADSKSERSESTSVTKYESVVVKTKGSSMVNGLDAQSSLPLSTVHTGASKSMENQKLVEESVNRASDEHMTRVAESRNSTKRSGPAGPVSKPSKHDPAKEDGRSGKAVARTSGSSSIDRDLQTHASDGRHIGNTNVSSSVNANGSAIAGSMKGSAPSPKIDSPGNESKAEVLPAKSSDVRASMVKDDRNDVADLPRGSSSRVVHSLGHDMAVVTYKSSDKVQKRAGSAEEPDRLGKRRKGDVDLREVEGEVRFAEREKLVDPRLADDRSGPDELGVYRTGDKPLERPKEKGNERYEREHRERLDRLDKSHEDDFIVEKYRDRSIERYGRERSIERIQERGSDRSFNRVPEKAKDDRSKLRYSDAPVEKLHADDRYHGQSLPPPPPLPPNIVPHSVGANRRDEDSDRRYAATRHSQRLSPRHEEKERRQSEETVVSQDDARRRKEDDFRDRKREERDGLSMKVEERDRERERDKANLLKEDLDLNAASKKRKLKREHLPASEPGEYSPVAPPPPLQGGGISQAYDGRDRGDRKGLIIQHASYMDEPGLRIHGKEVASKLNRRDPDPLNDREWDDEKRQRADQKRRHRK 1890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1363 1379 - -
Lal16g0969 1890 PANTHER THO COMPLEX SUBUNIT 2 7 1797 - -
Lal16g0969 1890 Coils Coil 1763 1783 - -
Lal16g0969 1890 Coils Coil 959 1021 - -
Lal16g0969 1890 PANTHER THO2 PROTEIN 7 1797 IPR040007 GO:0000347|GO:0006397|GO:0006406
Lal16g0969 1890 Pfam THO complex subunit 2 N-terminus 36 416 IPR032302 -
Lal16g0969 1890 Pfam THO complex subunit 2 N-terminus 444 582 IPR032302 -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1275 1300 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1349 1508 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1411 1453 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1525 1678 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1275 1320 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1483 1497 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1699 1803 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1848 1882 - -
Lal16g0969 1890 MobiDBLite consensus disorder prediction 1520 1890 - -
Lal16g0969 1890 Pfam Transcription- and export-related complex subunit 584 659 IPR021726 -
Lal16g0969 1890 Pfam Transcription factor/nuclear export subunit protein 2 936 1232 IPR021418 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0969 Lal-Chr16 6434926 6454786 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0969 16 6434926 6454786 Lal16g0969 16 6434926 6454786 ECH
Lal16g0969 16 6434926 6454786 Lal15g0944 15 7314174 7341569 LSH