Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0977 ATGGAGAGAGATTTCATGGGTCTTAGCTCAAAAGAATCACTTGTTGTGGTCAAGGAAGAGATCAACCATGACTCAGGCTTCATGATGAACTCGGCTGCACAATGGTTCTTCTCTAACAAAGTCTCTGCGGTTCCACATTTGATGTCTTTCAAGGCTTATCAAGATGACAAGATTAAAAAGATGGTGACAAACCAAAGTCAAGAAGCATTTGATTCTAGTAAAAAACACTCTGCTGGTGAACCCCTGAAATCTTTCAACCATGAGTGTCCTGTACAACATGATGTGAACATGGGGAACCAATTCCTGAAGAATCATTATGCAACTTCGGATCATAATATGAATGCTGTTAATGTGAAGCAGCCACTACTTGTCACAAAACCTCATTCAGATCTTCCCACCATTTGTTCTGTTGATGCAATCACTGAATCATGTAATGGTGTAAAACCATCTGCATCTTCTGCTCAACTTACCATCTTCTATGAGGGTACTGTGAATGTCTTTGATGATATCTCCACCGAGAAGGCACAAGCAATCATGTTTTTGGCTGGAAATGGCTTTTCTGCTGCTTTTAACATGGCACAACCAAAAATTCAGGTACCCGGCTCGAAGTTGAAAGCTAGTGATCCAATGCCTATGAGCCAACCTGCAAATACAGCACCCAGCTCTGGTCATTCAAGTCCTTTATCTGTCTCATCGCATAACCGTGTGCAGTCTGGAAATGGCTCAACTAGCAACAATGAGTTGCTAGCTTCTTGCACTCCTGTCAAAAATGCGGAGCCTCGGAAAGTAGTTGATGCAACCACTATGTTGACATCAGCTGCACCACAGGCTCGCAAAGCATCATTGGCTCGATTTTTAGAGAAACGCAAGGAAAGGGTAATGAATGCAGCACCATATAATCTTAACTTGAAGTCTGAGGAGTGTGCCACTGCTGAATACAATGGTGCTAATTTTCATGCGATTATTACTGCTTCTAATAATCTTTCAGCCAAGTAA 996 0.4197 MERDFMGLSSKESLVVVKEEINHDSGFMMNSAAQWFFSNKVSAVPHLMSFKAYQDDKIKKMVTNQSQEAFDSSKKHSAGEPLKSFNHECPVQHDVNMGNQFLKNHYATSDHNMNAVNVKQPLLVTKPHSDLPTICSVDAITESCNGVKPSASSAQLTIFYEGTVNVFDDISTEKAQAIMFLAGNGFSAAFNMAQPKIQVPGSKLKASDPMPMSQPANTAPSSGHSSPLSVSSHNRVQSGNGSTSNNELLASCTPVKNAEPRKVVDATTMLTSAAPQARKASLARFLEKRKERVMNAAPYNLNLKSEECATAEYNGANFHAIITASNNLSAK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0977 331 MobiDBLite consensus disorder prediction 64 85 - -
Lal15g0977 331 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 94 322 IPR040390 -
Lal15g0977 331 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 88 IPR040390 -
Lal15g0977 331 SMART tify_2 149 184 IPR010399 -
Lal15g0977 331 ProSiteProfiles Tify domain profile. 149 184 IPR010399 -
Lal15g0977 331 MobiDBLite consensus disorder prediction 200 247 - -
Lal15g0977 331 Pfam tify domain 151 183 IPR010399 -
Lal15g0977 331 PANTHER PROTEIN TIFY 7 94 322 - -
Lal15g0977 331 PANTHER PROTEIN TIFY 7 16 88 - -
Lal15g0977 331 Pfam Jas motif 275 299 IPR018467 -
Lal15g0977 331 MobiDBLite consensus disorder prediction 211 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0977 Lal-Chr15 7720569 7724960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0977 35 305 Tify Gene Family AT3G17860 37.377 2.55e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal15g0977 tify 5.4e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0977 15 7720569 7724960 Lal15g0977 15 7720569 7724960 ECH
Lal16g0989 16 6580176 6583077 Lal15g0977 15 7720569 7724960 LSH