Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0955 ATGGCGACCATGACGAGCTTGATCGGTCTTATCAACAAGATCCAACGTGCTTGCACTGTTTTGGGTGATCATGGCGGTGAGGGTTTGTCTCTTTGGGAAGCTCTTCCCTCTGTTGCTGTCGTTGGAGGACAGAGTTCAGGGAAATCTTCAGTGTTGGAAAGTGTGGTCGGAAGAGATTTTTTGCCTCGTGGATCTGGTATTGTTACACGGAGGCCACTAGTGCTTCAACTTCATAAGACGGAGGATGGGCAGGAATATGCTGAGTTTCTTCACATACCACGAAAGCGATTCACAGACTTTGTTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGCATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCAGCTCAGCATTTATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCCGGGTTGACGAAGGTTGCAGTAGAGGGACAACATGAGAGTATTGTTGAAGATATCGAAAACATGGTTCGTGCATATGTTGAGAAGCCAAACTGCATTATCTTGGCTATCTCTCCCGCAAATCAAGATATTGCCACTTCAGATGCTATAAAACTTGCCAGAGAAGTTGATCCTGCAGGTGAAAGAACCTTTGGAGTGGTTACAAAACTTGATCTTATGGATAAAGGAACTAATGCTGTTGATGTTCTTGAGGGAAGGTCATACAGGCTGCAACATCCATGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATCGTTGCTCGTAAGAAGGAGCGTGAATATTTCGAGACGAGTCCCGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCAAAGCTTCTGTCTCAGCATTTGGAGCTAGTTATTAGACAGAAGATACCTAGTATCATTGCCTTAATAAATAAGACCATCGACGAGCTTAATGCAGAGTTGGACCGTATCGGCAGGCCAATTGCTGTGGACTCAGGGGCCCAACTATACACTATTTTAGAAATGTGTCGTGCATTTGACAAAGTATTTAAGGAGCACCTGGATGGAGGACGTCCTGGCGGGGACAAGATATATGGTGTTTTTGATCACCAATTACCAGCTGCTTTGAAAAAGCTCCCCTTCGATCGCCATCTTGCATTAAAAAATGTCCAGAGAGTTGTCACTGAAGCCGATGGATATCAGCCCCATCTGATTGCTCCAGAGCAGGGATATAGAAGACTCATTGACGGGTCTATCAGCTATTTCAAAGGCCCAGCTGAAGCCTCTGTGGATGCTGTCCACTTTGTTTTAAAGGAGCTCGTACGAAAGTCAATTGTGGCAACTGAGGAGTTAAAACGATTTCCAACACTTTCGAATGATATTGCAACCGCTGCAAATGAATCGTTGGAAAGATTCCGAGAAGAAAGCAGGAAGACAGTCTTACGGTTGGTTGATATGGAGTCCAGCTATCTGACAGTGGAGTTTTTCAGGAAGATTCATCTTGAACCAGAAAAGAATCCGAATGCACCAAATGCACCAAATCGGGGTGGTGCCCCTATAGACAATTACACTGACAATCATCTCCGGAAGATTGGATCCAATGTTAATGCATATATCGGCATGGTTTGCGAAACACTTAAGAATTCTATACCAAAGGCTGTAGTTTATTGTCAAGTTAGAGAGGCTAAGAGATCATTGCTTAACCGCTTTTACATTCAAGTTGGGAGGAAGGAGAAGGAGAAATTGGGAACCATGTTGGATGAAGACCCAGCACTTATGGAAAAGAGAGCACAATTAGCTAAAAGGCTTGAACTGTATAAGCAAGCTAGGGATGATATTGATTCAGTGGCTTGGAAATAA 1848 0.4307 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQEYAEFLHIPRKRFTDFVAVRKEIADETDRITGKTKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQHESIVEDIENMVRAYVEKPNCIILAISPANQDIATSDAIKLAREVDPAGERTFGVVTKLDLMDKGTNAVDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLELVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDKIYGVFDHQLPAALKKLPFDRHLALKNVQRVVTEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIVATEELKRFPTLSNDIATAANESLERFREESRKTVLRLVDMESSYLTVEFFRKIHLEPEKNPNAPNAPNRGGAPIDNYTDNHLRKIGSNVNAYIGMVCETLKNSIPKAVVYCQVREAKRSLLNRFYIQVGRKEKEKLGTMLDEDPALMEKRAQLAKRLELYKQARDDIDSVAWK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0955 615 SMART GED_2 519 612 IPR003130 GO:0003924|GO:0005525
Lal15g0955 615 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 300 IPR030381 GO:0005525
Lal15g0955 615 Pfam Dynamin family 38 212 IPR045063 -
Lal15g0955 615 PANTHER DYNAMIN 4 615 IPR022812 -
Lal15g0955 615 Pfam Dynamin GTPase effector domain 520 612 IPR003130 GO:0003924|GO:0005525
Lal15g0955 615 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lal15g0955 615 ProSiteProfiles GED domain profile. 524 615 IPR020850 -
Lal15g0955 615 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Lal15g0955 615 Gene3D - 4 309 IPR027417 -
Lal15g0955 615 PRINTS Dynamin signature 35 53 IPR022812 -
Lal15g0955 615 PRINTS Dynamin signature 60 77 IPR022812 -
Lal15g0955 615 PRINTS Dynamin signature 132 149 IPR022812 -
Lal15g0955 615 PRINTS Dynamin signature 182 200 IPR022812 -
Lal15g0955 615 PRINTS Dynamin signature 201 217 IPR022812 -
Lal15g0955 615 PRINTS Dynamin signature 224 243 IPR022812 -
Lal15g0955 615 CDD DLP_1 35 300 IPR001401 GO:0003924|GO:0005525
Lal15g0955 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 308 IPR027417 -
Lal15g0955 615 Gene3D Dynamin, middle domain 333 592 - -
Lal15g0955 615 PANTHER BNAA09G45430D PROTEIN 4 615 - -
Lal15g0955 615 Pfam Dynamin central region 221 488 IPR000375 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0955 Lal-Chr15 7441208 7447808 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0955 15 7441208 7447808 Lal15g0955 15 7441208 7447808 ECH
Lal15g0955 15 7441208 7447808 Lal23g0665 23 9348333 9355844 LSH