Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0950 ATGGCTTCTCTCTCTCTTCAACACAATACCCACCATTTCCTCTCTCGGGCCCTCCGAACCCAGCCCAAGCCCAAGCCCACCTCCGTCCGAATGTCCCTCCAACAAGACGCTCCCTCCATCGCCGTCGTCGGCGTCACCGGCGCCGTCGGCCAGGAGTTCCTCTCCGTCCTCTCCGATCGTGACTTCCCCTACCGCTCCATCAAAATGCTCGCCTCCAAGCGCTCCGCCGGACGCCGCCTCACCTTCGAGAACAACGAATACGTCGTGGAGGAGCTCAAGCCGGAGAGCTTCGACGGCGTCGACATTGCTTTGTTCAGCGCTGGAGGTTCAATCAGTAAGAAATTCGGTCCTATCGCTGTGGAACGTGGCACTATCGTTGTGGATAACAGTTCGGCGTTTCGGATGGATGAGAAGGTTCCATTGGTGATTCCAGAGGTGAATCCTGAAGCAATGGAGAATATTAAGATTGGAATTGGGAAAGGAGCTATCATTGCTAACCCTAATTGTTCCACCATTATTTGTTTAATGGCTGCTACTCCTCTTCATAAAAGGGCCAAGGTATTGCGCATGGTTGTTAGTACATATCAGGCAGCTAGCGGTGCTGGTGCTGCTGCAATGGATGAGCTTGAGCTGCAAACTCGTGAGGTATTAGAAGGAAAACCGCCAACTTGTAAAATATTTAACCAGCAGTATGCTTTTAACATATTCTCACACAATGCACCTGTTCTTCCAAATGGGTATAATGAAGAAGAAATGAAAATGGTCAAGGAGACAAGGAAAATATGGAATGACAAGGATGTTAAAGTAACTGCTACATGTATACGGGTTCCTGTCATGCGAGCTCATGCCGAGAGTGTGAATCTTCAGTTTGAGAGTCCTCTTGATGAGGACACAGCAAGAGATATTCTGAAGAATGCTCCAGGTGTAGTGGTTATTGATGACCGTGAATCCAATCATTTTCCTACTCCATTGGAAGTGTCAAATAAGGATGATGTTGCTGTTGGCAGAATTCGCCAGGACTTGTCTCTGGATGGAAATCAAGGGTTGGACATATTTGTATGTGGGGATCAAATTCGTAAGGGAGCTGCACTAAATGCTATCCAGATTGCTGAGATGTTGCTATGA 1125 0.4809 MASLSLQHNTHHFLSRALRTQPKPKPTSVRMSLQQDAPSIAVVGVTGAVGQEFLSVLSDRDFPYRSIKMLASKRSAGRRLTFENNEYVVEELKPESFDGVDIALFSAGGSISKKFGPIAVERGTIVVDNSSAFRMDEKVPLVIPEVNPEAMENIKIGIGKGAIIANPNCSTIICLMAATPLHKRAKVLRMVVSTYQAASGAGAAAMDELELQTREVLEGKPPTCKIFNQQYAFNIFSHNAPVLPNGYNEEEMKMVKETRKIWNDKDVKVTATCIRVPVMRAHAESVNLQFESPLDEDTARDILKNAPGVVVIDDRESNHFPTPLEVSNKDDVAVGRIRQDLSLDGNQGLDIFVCGDQIRKGAALNAIQIAEMLL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0950 374 TIGRFAM asd_B: aspartate-semialdehyde dehydrogenase 39 373 IPR005986 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Lal15g0950 374 Hamap Aspartate-semialdehyde dehydrogenase [asd]. 37 374 IPR012080 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Lal15g0950 374 Gene3D Dihydrodipicolinate Reductase; domain 2 169 356 - -
Lal15g0950 374 PANTHER BNAA09G26740D PROTEIN 31 374 - -
Lal15g0950 374 Gene3D - 40 373 - -
Lal15g0950 374 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 168 361 - -
Lal15g0950 374 SMART Semialdhyde_dh_3 39 154 IPR000534 GO:0016620|GO:0051287
Lal15g0950 374 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 31 374 - -
Lal15g0950 374 PIRSF ASA_dh 37 374 - -
Lal15g0950 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 196 IPR036291 -
Lal15g0950 374 Pfam Semialdehyde dehydrogenase, dimerisation domain 180 360 IPR012280 GO:0008652|GO:0016620|GO:0046983
Lal15g0950 374 MobiDBLite consensus disorder prediction 1 29 - -
Lal15g0950 374 Pfam Semialdehyde dehydrogenase, NAD binding domain 40 153 IPR000534 GO:0016620|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0950 Lal-Chr15 7376061 7379564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0972 16 6460987 6464287 Lal15g0950 15 7376061 7379564 LSH
Lal15g0950 15 7376061 7379564 Lal23g0670 23 9378973 9383483 LSH