Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0947 ATGCCTCTTTCTTCATCGCCTCCTTTGAGGATGATTTATTTGACCAACTTTGGAACTGAACTATTCCAAAATGAGACAGTGGGTAAGAATGAGGAAGAAGAATTCAACACTGGACCACTGTCTGTACTTATGATGAGTGTTAAAAATAATACTCAGGTTCTGATTAATTGCCGTAACAACAGAAAGTTGCTTGGTCGTGTTCGGGCTTTTGATAGACACTGCAACATGGTCCTTGAAAATGTCCGGGAGATGTGGACCGAGGTGCCAAAGACGGGTAAGGGAAAGAAAAAGGCTCAGCCAGTTAACAAGGACAGATTCATCAGCAAAATGTTTCTTCGCGGGGACTCTGTGATCATTGTTCTTAGGAACCCCAAATGA 378 0.4259 MPLSSSPPLRMIYLTNFGTELFQNETVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0947 125 SUPERFAMILY Sm-like ribonucleoproteins 38 123 IPR010920 -
Lal15g0947 125 Gene3D - 33 125 - -
Lal15g0947 125 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 24 125 IPR027248 GO:0008380|GO:0030532
Lal15g0947 125 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 24 125 - -
Lal15g0947 125 Pfam LSM domain 46 120 IPR001163 -
Lal15g0947 125 SMART Sm3 43 122 IPR001163 -
Lal15g0947 125 CDD Sm_D2 35 124 IPR027248 GO:0008380|GO:0030532
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0947 Lal-Chr15 7370658 7372391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0947 15 7370658 7372391 Lal15g0947 15 7370658 7372391 ECH
Lal16g0971 16 6459375 6461304 Lal15g0947 15 7370658 7372391 LSH
Lal15g0947 15 7370658 7372391 Lal23g0671 23 9385747 9388834 LSH