Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0903 ATGGATGGAGATAACGGTCTCAACATGCGTAATTGGGGTTACTATGAGGCTACAACACCATTTAAGAACCACCTTGGACTACAGCTGATGTCCTCCATGCCCGAAAAACAACCTCTGCTCGGAGCACGCAATGCTGCTGCTCCGTTCCACCATAGGGACATTGGGATGTCCCAATCGGCGTACCCTATGGAGTACATGAGGAATGCTTGGATTGGTCATAATCATAGAGATAGGTTTATGAATATGAATATCAATATGATACCAACAAACCACAATTATTCTCTTGCTCCTGAGACATCATCAGCTCATCAAATGCAAATGGTTGAAGCGCAACAACAACCAACTGAACAGTCCGAGGAAGAAACACCGACGGAAGAGGAAACACCTGTTGAGAAGGTCAATGGAACTGGAAAGAAAAGGGGCAAGGGTTCGAAGGTTCCCAAGGCCCTGAAGGCGAAGAAGACCAAGAGAGGACCTCGTGAGCCAAAGGATAAGGATGCTCCATCAGTTCAACGAGCTAGGACTGTAAGGAAAAGTGCTGAAATTGTAATAAATGGGATTGATATGGATCTTTCGAGCATTCCTATACCTGTTTGTTCATGTACTGGGGCACTTCAACAGTGTTACCGATGGGGCTCTGGTGGGTGGCAATCTGCATGTTGCACAACAGGCATATCAATTTATCCTTTGCCTATGAGTACCAAGCGACGTGGGGCAAGGATAGCTGGAAGAAAAATGAGCATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATTGATTTGAAGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 864 0.4479 MDGDNGLNMRNWGYYEATTPFKNHLGLQLMSSMPEKQPLLGARNAAAPFHHRDIGMSQSAYPMEYMRNAWIGHNHRDRFMNMNINMIPTNHNYSLAPETSSAHQMQMVEAQQQPTEQSEEETPTEEETPVEKVNGTGKKRGKGSKVPKALKAKKTKRGPREPKDKDAPSVQRARTVRKSAEIVINGIDMDLSSIPIPVCSCTGALQQCYRWGSGGWQSACCTTGISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0903 287 Pfam GAGA binding protein-like family 1 287 IPR010409 -
Lal15g0903 287 PANTHER - 1 287 IPR010409 -
Lal15g0903 287 SMART GAGA_bind_2 1 287 IPR010409 -
Lal15g0903 287 MobiDBLite consensus disorder prediction 94 174 - -
Lal15g0903 287 MobiDBLite consensus disorder prediction 139 156 - -
Lal15g0903 287 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 287 - -
Lal15g0903 287 MobiDBLite consensus disorder prediction 157 172 - -
Lal15g0903 287 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0903 Lal-Chr15 6846026 6846889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0903 1 287 BBR or BPC Transcription factor family AT2G01930 49.495 5.68e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lal15g0903 GAGA_bind 1.2e-104 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0903 15 6846026 6846889 Lal15g0903 15 6846026 6846889 ECH