Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1464 ATGGCAAACAATAGGAACATGGAAAAGATGGCATCAATTGATGCACAACTTAGGCAATTGGCTCCAGCCAAAGTGAGTGAAGATGATAAACTGATTGAGTATGATGCTCTATTACTGGATCGGTTCCTTGATATTTTGCAGGACTTGCATGGAGAGGATCTGAAGAACACAGTTCAAGATGTATATGAGCTTTCCTCTGAGTATGAAGGAAAGCATGATCCTAAGAAACTGGAAGAAATTGGAAATGTCATAACCAGTTTGGATGCTGGAGACTCTATTGTTGTGGCCAAGTCTTTTTCTCATATGCTTAACTTGGCCAATTTAGCTGAAGAGGTTCAGATTTCTCACCGCCGAAGGAACAAGTTGAAGAAAGGAAATTTTGCAGATGAGACCAATGCAACTACAGAATCAGACATTGAAGAAACTCTCAAGAGACTTGTCTTTGATTTGAAGAAATCTCCTCAGGAAGTTTTTGATGCACTGAAAAACCAAACTGTTGATCTAGTCCTTACTGCTCATCCTACTCAATCAATTCGCCGATCTTTACTTCAGAAGCATGCAAGGATACGAAATTGTTTATCTCAATTGTATGCCAAAGACATTACTCCTGATGATAAGCAAGAGCTTGATGAGTCTCTACAGAGGGAGATTCAAGCTGCTTTCCGTACTGATGAAATCAAGAGGACTCCTCCAACACCACAAGATGAGATGAGAGCTGGGATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTGCCGAAATTTCTACGTCGTATTGACACTGCTTTGAAGAATATAGGGATTAATGAGCGCGTTCCGCATAATGCTCCTGTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGATGGTAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTGTTGGCTAGAATGATGGCTTCTAATATGTATTATTCCCAGATAGAAGACCTCATGTTCGAACTGTCTATGTGGCGTTGCAGTGATGAGCTACGTGATCGTGCAGATGAACTTCACAGGTCTTCAAATAAAGATGAAGTTGCAAAACACTATATAGAATTTTGGAAAAAGGTCCCCCCAAATGAGCCATATCGTGTGGTGCTGGGTGAGGTAAGGGACAGGCTCTATCAGACTCGTGAACGTTCTCGCCATTTGCTAGCTCATGGGTACTCTGACATTCCAGAGGAAGCAACTTTCACCAATGTTGAAGAGTTCCTGGAACCTCTTGAAGTTTGTTACAGATCACTCTGTGCTTGTGGTGATCGTTCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTATCCACATTTGGTCTGTCACTTGTGAGGCTTGATATCCGGCAAGAGTCGGACCGTCACACTGATGTGATGGACGCTATTACCAAACATTTGGAAATTGGCTCCTACCAGGAATGGTCGGAAGAAAAAAGACAAGAATGGCTTTTGTCTGAACTGTGCGGCAAAAGGCCATTGTTTGGACCTGACCTTCCCAAAACTGAAGAAATTAGAGATGTTTTGGACACATTTCATGTCCTGGCAGAACTACCACCAGACAACTTTGGAGCATATATCATATCAATGGCAACTGCACCATCTGATGTGCTAGCAGTTGAACTTCTACAACGCGAATGCCATATCAAGCATCCATTAAGAGTTGTCCCATTGTTTGAGAAGCTTGCAGATCTTGAGGCTGCTCCTGCTGCTTTGGCTCGATTGTTCTCAGTAGATTGGTACAAAAATAGGATCGACGGGAAGCAAGAAGTCATGATTGGGTATTCAGATTCGGGAAAGGATGCTGGAAGGTTTTCTGCGGCATGGCAGCTATATAAGGCCCAAGAGGATCTCATAAAAGTAGCTGAGAAATTTGGCGTTAAGCTAACCATGTTCCATGGCCGTGGTGGAACTGTTGGAAGAGGAGGTGGTCCCACTCACCTTGCTATCCTGTCTCAACCTCCAGGCACAATCCATGGATCACTTCGTGTAACAGTCCAAGGTGAAGTTATTGAGCAATCGTTTGGAGAGCAACACTTGTGCTTTAGAACACTTCAACGTTATACTGCTGCTACTTTAGAACATGGAATGAATCCTCCAATTTCTCCAAAACCAGAATGGAGAGCTTTGATGGATCAGATGGCTGTCGTTGCTACTGAGGAATACCGTTCTATTGTATTCAAAGAACCACGCTTTGTTGAGTATTTCCGTCTGGCTACACCAGAGTTAGAGTACGGTCGGATGAACATTGGAAGTCGACCTGCAAAGCGAAGGCCTACTGGTGGCATTGAAACACTTCGCGCAATACCTTGGATCTTTGCATGGACACAGACAAGGTTTCATCTTCCAGTGTGGCTCGGCTTTGGAAAAGCATTTAAACAGGTTATTGAGAAGGATGCTGGGAATCTTCTTATGCTGCAAGAGATGTATAACCAGTGGCCTTTCTTTAGGGTCACCATTGATTTAGTGGAAATGGTTTTTGCCAAAGGAGACCCTGGAATAGCTGCTCTCAATGATAGGCTCCTTGTTTCAAAGGATCTGTGGCCATTTGGGGAGCAGTTGAGGAAAAAATATGAAGAAACCAAGAATCATCTCCTTCAGGTGGCTGCACACAAGGATCTTCTTGAAGGAGACCCTTACTTGAAGCAAAGACTCAGGTTGCGCGATTCTTACATTACTACCCTAAATGTTTTCCAAGCTTACACATTGAAACGCATTCGTGACCCGAACTTTAATGTGCCGCCTCGCCCTCATATCTCGAAAGATTATCTGGAGAAAAGTAAATCTGCTACTGAACTTGTATCACTGAACCCAACAAGTGAATATGCACCTGGTTTGGAAGACTCCCTCATTCTCTCAATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA 2907 0.4334 MANNRNMEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKNTVQDVYELSSEYEGKHDPKKLEEIGNVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISHRRRNKLKKGNFADETNATTESDIEETLKRLVFDLKKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHARIRNCLSQLYAKDITPDDKQELDESLQREIQAAFRTDEIKRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRIDTALKNIGINERVPHNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMASNMYYSQIEDLMFELSMWRCSDELRDRADELHRSSNKDEVAKHYIEFWKKVPPNEPYRVVLGEVRDRLYQTRERSRHLLAHGYSDIPEEATFTNVEEFLEPLEVCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEEKRQEWLLSELCGKRPLFGPDLPKTEEIRDVLDTFHVLAELPPDNFGAYIISMATAPSDVLAVELLQRECHIKHPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRIDGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAEKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPGTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMNPPISPKPEWRALMDQMAVVATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPTGGIETLRAIPWIFAWTQTRFHLPVWLGFGKAFKQVIEKDAGNLLMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSKDLWPFGEQLRKKYEETKNHLLQVAAHKDLLEGDPYLKQRLRLRDSYITTLNVFQAYTLKRIRDPNFNVPPRPHISKDYLEKSKSATELVSLNPTSEYAPGLEDSLILSMKGIAAGMQNTG 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1464 968 Gene3D Phosphoenolpyruvate/pyruvate domain 309 446 - -
Lal11g1464 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 594 606 IPR033129 -
Lal11g1464 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Lal11g1464 968 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 34 968 IPR015813 GO:0003824
Lal11g1464 968 Hamap Phosphoenolpyruvate carboxylase [ppc]. 24 968 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 3 968 - -
Lal11g1464 968 Pfam Phosphoenolpyruvate carboxylase 36 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 281 296 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 443 463 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 592 612 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 634 663 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PRINTS Phosphoenolpyruvate carboxylase signature 766 792 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal11g1464 968 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 3 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1464 Lal-Chr11 17927097 17933073 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1464 11 17927097 17933073 Lal11g1464 11 17927097 17933073 ECH
Lal20g0374 20 2993657 2999975 Lal11g1464 11 17927097 17933073 LSH
Lal11g1464 11 17927097 17933073 Lal1g0602 1 3846060 3851976 PCT
Lal11g1464 11 17927097 17933073 Lal2g0632 2 3757259 3763295 PCT
Lal11g1464 11 17927097 17933073 Lal9g0549 9 3715922 3721726 PCT